Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0023 |
Symbol | |
ID | 4461334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 35568 |
End bp | 36401 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639700775 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_844161 |
Protein GI | 116747474 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.140146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.179482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAT ATTTCAGCGA CGCCATGCAG ACCCTCCTCA GGCAGGTTCA CATCAACATG CCGATCAAGC TCCTGCCGAA ATACCTGGAG ATGATTCTGC ATTACCGGCT CAACGTGGAG CTGGGCTTCG AGGCGGTGGA GCTGGACCGG ATGTCGGGGA AAGAACTGAG TGCCGTCGCC GGGAAGCTTC ACGGGAGGAA CTGCCGCATC AGCCTGCACG GGCCTTTCTG GGACCTGAGC ACGGGCAGCG TCGATCCTTT GATTCGCAAG GTTTCGGTTT CGCGGTTTCA GCAACTGTTT GAAACGCTGG ACATTTTTCG CCCGGTCCAG GTGGTCCTGC ACACGGGGTT CGACCCACGG CATCATCGCG GGCACCGGCG CGCCTGGCTG GACAACAGCA TGGCCATCTG GGAGCCGTTG GTGAAACGCG CCGAAGGGCT GAACATCCCG CTGCTGCTGG AAAACGTCTG GGAAAGGGAC CCGGAGCTGC ACCTGGAACT GTTCGGGAGG ATCGATTCAC CGTTTTTCGG CTTCTGCCTG GATGTCGGAC ACCAGCACAG CTTTTCCGGG ACTGCCCTCT CGGTATGGCT GGAAGCCTTG TGGCACGTTC TCAGGGAGAT TCACGTGCAC GATAACGACG GGAGCCGGGA TGCTCACCTG CCGGTGGGGC GCGGGAGCAT CGATTTTGCG CTCCTGTTCG ATTTCCTGAA GGCCAGGAAC CTGACTCCTC TCTTGACTCT CGAACCCCAC CTGGAAGAAC ATCTTCCCGA GAGCCTGTCC GGTCTGATGA GGGTGATGAC GGCCTGCGGA ACCGCGTGGC CCGTCTTGTC GTAG
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Protein sequence | MKPYFSDAMQ TLLRQVHINM PIKLLPKYLE MILHYRLNVE LGFEAVELDR MSGKELSAVA GKLHGRNCRI SLHGPFWDLS TGSVDPLIRK VSVSRFQQLF ETLDIFRPVQ VVLHTGFDPR HHRGHRRAWL DNSMAIWEPL VKRAEGLNIP LLLENVWERD PELHLELFGR IDSPFFGFCL DVGHQHSFSG TALSVWLEAL WHVLREIHVH DNDGSRDAHL PVGRGSIDFA LLFDFLKARN LTPLLTLEPH LEEHLPESLS GLMRVMTACG TAWPVLS
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