Gene Sfum_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0022 
Symbol 
ID4461333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp35199 
End bp35504 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content57% 
IMG OID639700774 
Producthypothetical protein 
Protein accessionYP_844160 
Protein GI116747473 
COG category[S] Function unknown 
COG ID[COG0011] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00106] uncharacterized protein, MTH1187 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0601173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.292337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTGG TTGAGGTCAG CATCGTTCCG ATCGGGGTGC CGGGCACGAG CCTTAGCACG 
CACGTGGCAA AGGTCCTCAA AGTGCTCAAG GAAAGCTCGC TTCAGTATGA ACTGACGGCA
ATGGGCACGA TCGTGTCGGG GGATCTCGAT GAAATCCTGC CGGTTCTGAA GCGAATGCAT
GAGAGCTGTT TCGGTCCAGA GGTGACTCGG GTGCTGACGC AGATCCGGAT TGACGATCGC
AGAGATCGGA AGGGCACTCC CGAGCAGAAG ATTCGATCCG TCATGGACAA GTTGACCGAT
CGATAA
 
Protein sequence
MAVVEVSIVP IGVPGTSLST HVAKVLKVLK ESSLQYELTA MGTIVSGDLD EILPVLKRMH 
ESCFGPEVTR VLTQIRIDDR RDRKGTPEQK IRSVMDKLTD R