| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0020 |
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| Symbol | |
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| ID | 4461331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 32284 |
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| End bp | 34755 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639700772 |
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| Product | ATP-dependent protease, putative |
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| Protein accession | YP_844158 |
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| Protein GI | 116747471 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.140592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.225222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGAA AATTCCCGGA ACTTTCAGTG AAAGAATTGA GAGCATACAT CGAACCGGAA
ACACTTCCCT TTGAGACGAC CGCTTCCCTG GAGGCTCCGG GAGACCGGGT GGTGGGGCAG
GAAAGGGCCA TCGACGCCAT ACAGTTCGGT ATGGGCATGA AGACGAGCGG CTACAACATC
TTCATCGCGG GGCCCGCCAA GGCCGGTCTG ACGTTCATGG CGAAATCGTT CATCGAGGAA
CGGGCGCGCA AGGAACCGAC GCCCCCCGAC TGGTGTTATG TCTTCAATTT CAAGGAGCAG
GACAAACCCA AGTGTCTCAA GGTGACGCCC GGTCGGGGCA AGGCGCTCAA GAAAGACATG
AATGAGTTCA TCGATACGCT GCAGGCCAAA ATCCCCGAAG TTTTCGACAG CGACGATTAC
CGGGCCAAGG AAAGCGAGGT GCACCAGGCC TTTGAGAAGC AGCGCCGGGA AATCATCGAT
GAGCTCTCGC AGCAGGCAAA GGACCAGGGG TTCATTCTGC AGTTCTCCCA GGTCGGAATG
GTGATCATCC CCGCCAATAA GGAAGGGGAA CCCATGACCC AGGAGGATTT GCGGCACCTG
GGCGAGGAAG AGCGGTTGGT GCTGCGGGAA AAGAGCGACG AGCTCCACGA AAAGATGAAA
GAGGCGATCA AGCACATCCG CGAGGCCGAA GCCGAATTCA AGGATAAACA CACGAAATTG
GACAATGAGA TCGCGCTCTT CGTCGTCGGC CAGCTCATGG ATACCTACGA GGAAACGTAC
AAGGACGACG AACAGGTACT CGAATACCTG AAGATGGTCC AGGAAGACAT CCTCGAAAAC
ATCGAGGATT TCAAGAAGAA ACCCGAAGCG GCCCAGCAGC AGGGACAGCC CGGCACACCT
TTCCCGATGC CCACGCGGGA AACCGCCATG CGCAAGTACG ACGTGAATGT CCTCATCGAC
AATTCGGAAA CGGAAGGCGC TCCCGTGGTC ATCGAATCCA ACCCCGCTTA CCCGAACATT
TTCGGGTCCA TCGAACGGCA GGCGTGGTTC GGAGCGCTGT TCACCGACCA TACCATGATC
AAGGCGGGAG CGCTTCACAA GGCCAATGGC GGGTATCTCG TCATGAAGGC GCTGGACCTG
TTGAAGTGGT TCGTCACCTA CGAGGCCCTC AAACGGGCGC TCCGGGACGG TGAGGTCCGG
ATCGAGGATC TGGGCGAACT GTACGGTATT TTCAGCACCC GCACCATTCG CCCGGAGCCC
ATCCCGCTCA ACGTCAAGAT CGTCCTCACC GGCGACCCGT ACATCTACCA GTTGCTCTAC
ACCTACGATG ACCGCTTCCA GAAGCTGTTC AAGGTCAAGG CCCATATGGA CGATCAGATG
GACCGCAGCG AGGACAAGCT CCTCCAGTGC GCCGGGATGA TCAGCCGCTA TTGCGAGGAC
CACAAACTGC GCCATCTCGA CCGGACCGGC GTATCCCGCG TGCTCGAATA CAGCGTGGAG
CTCACGGAAG ACCGCGACAA GCTCACTTTG GAGTTCGGCA CCATCGGCGA TCTGCTCAAG
GAAGCCAATT ACTTCGCCGG GATCGAGGAC TGCGAATTCG TCAAGCGCGA GCATGTGGAG
CAGGCGATCA AGAAACGGAT CTACCGCTCC AACCTCATCG AGGAGCGCAT GAAGGAGATG
ATGCTCAAGG ACATCTTCTG GGTGGAAACC ACGGGCGGCA AGGTCGGCCA GGTGAACGGC
CTTTCCGTGC TCATGGCGGG GGATCACGTG TTCGGAAGGC CGAACCGCAT CACGTGTTCG
GTGTCGGTGG GCCGCGAGGG CATGATTTCC ATCGATCGGG AATCCAAGAT GAGCGGGCCG
ACCCACACCA AGGGCCTCAT CATCCTGAGC AGCATCCTCA AAGACCGCTT CGCCCACAAC
AAGCCGATCT CGCTCAACGC GTCCCTGTGT TTCGAGCAGA GCTACGGCAT GGTGGACGGC
GACAGCGCGT CGAGCACCGA GCTGTACGTG CTCCTGAGCG CCATTGCCGA CGTCCCCATC
AAGCAGGGAA TCGCCGTCAC CGGGTCGGTG AGCCAGAAAG GCGAGATTCA GCCCATCGGC
GGGGTGAACC ACAAGGTCAA GGGATTCTTC GACATCTGCA AACACAAGGG ATTGACCGGA
AAACAGGGCG TCATGATCCC GTCCAAGAAT GTCCGCAACC TGATGCTCGA CCAGGAAGTG
ATCGATGCCG CCAAGGAAGG CAAGTTCCAT ATCTGGCCGG TTTCGACCAT CGAGGAAGGG
ATCGAGCTCC TCACGGGAAT GAAAGCCGGC AAACTGCAGC CGGACGGAAC CTACCCCGAG
GGCACCCTGT TCCGCAAGGT CGATGACCGC CTCAGAGAGA TTGCGGAGAT CGTCAAGACC
TTCGGAAAGG ACTCCGACAA CGGCAGAAAG TCCTCCGAGG AGGAGGGCGG CTGCTCCGGC
TGCGGAGCCT GA
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| Protein sequence | MARKFPELSV KELRAYIEPE TLPFETTASL EAPGDRVVGQ ERAIDAIQFG MGMKTSGYNI
FIAGPAKAGL TFMAKSFIEE RARKEPTPPD WCYVFNFKEQ DKPKCLKVTP GRGKALKKDM
NEFIDTLQAK IPEVFDSDDY RAKESEVHQA FEKQRREIID ELSQQAKDQG FILQFSQVGM
VIIPANKEGE PMTQEDLRHL GEEERLVLRE KSDELHEKMK EAIKHIREAE AEFKDKHTKL
DNEIALFVVG QLMDTYEETY KDDEQVLEYL KMVQEDILEN IEDFKKKPEA AQQQGQPGTP
FPMPTRETAM RKYDVNVLID NSETEGAPVV IESNPAYPNI FGSIERQAWF GALFTDHTMI
KAGALHKANG GYLVMKALDL LKWFVTYEAL KRALRDGEVR IEDLGELYGI FSTRTIRPEP
IPLNVKIVLT GDPYIYQLLY TYDDRFQKLF KVKAHMDDQM DRSEDKLLQC AGMISRYCED
HKLRHLDRTG VSRVLEYSVE LTEDRDKLTL EFGTIGDLLK EANYFAGIED CEFVKREHVE
QAIKKRIYRS NLIEERMKEM MLKDIFWVET TGGKVGQVNG LSVLMAGDHV FGRPNRITCS
VSVGREGMIS IDRESKMSGP THTKGLIILS SILKDRFAHN KPISLNASLC FEQSYGMVDG
DSASSTELYV LLSAIADVPI KQGIAVTGSV SQKGEIQPIG GVNHKVKGFF DICKHKGLTG
KQGVMIPSKN VRNLMLDQEV IDAAKEGKFH IWPVSTIEEG IELLTGMKAG KLQPDGTYPE
GTLFRKVDDR LREIAEIVKT FGKDSDNGRK SSEEEGGCSG CGA
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