| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0013 |
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| Symbol | |
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| ID | 4460162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 21465 |
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| End bp | 23087 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639700765 |
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| Product | methyl-viologen-reducing hydrogenase, delta subunit |
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| Protein accession | YP_844151 |
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| Protein GI | 116747464 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.779838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGTTCA CGCGCGACTT CGATGAAACG AGCAGGGGAA TGGACGAACT AAAGATCGTA
CTGTTTGTGT GCAACTGGGG TCCTCACGCG GCTCTTCAGA CGCTTCAGGA CCAAGACCGC
GACATCCCGC ACCAGGTGAG GATGATCCGG ATCCCGTGCA CGGGGCGAAT CAGCAAGACC
TTGCTGTTCA AAGCCTTCGA ACGGGGCGCC GACGGCGTGG CGCTCATCGG GTGCACCCCG
GGAACCTGCC GCTACGGCGC GGGCACCTAC ACCGCGGAAC GCAACGTGGA GGGAGCCCGG
GGAATCCTCG ATCTTCTCGG CCTCGGAAAG GACCGTTTGC GCCTGGCCAC CTTTCTCCCC
GAGGAAGCCT CGCCCCTGCT CGATTTTCTC AACGACTTCA CCGACCAGGT ACGGGGCATG
GGAAAAAGCC CCGTCACCCC CGTGCCGCTG AAGCAACCCG CGCACGACGG AAGACGCAAC
ACCGCCGAAG TCTTGAAGGC TCACGACGTC TATGCGTGCC AGGACTGCGG GAAATGCTCC
TCCGCGTGTC CGATGGCCCT CTCGGGAAGG CCCTATTCCC CCCGCGCCAT CGCCAACTCC
ATCATCGCGG GCTCGGGCAA TACGCCGGCC GTGGTAAACG ATGTCTGGTC CTGCCTGACC
TGCGGCATCT GTTATGACCG GTGCCCTTCC GCCGTCGATT TCCCGGCGTT TATCCGTGAA
ATGCGCTGCG TCCAGAAGGC GTCCGGGAAG AGCGGGCATG AAGCCCACGA AGGGTTCTTC
CAGTCCCTGA TGCGGGCGAT GACCTCGCCG GACCTGCGCA CCCAACACTG GAAATGCCTC
CCGGAAGGGA TCCGCACGGA CCAGCAGAGC AAGACCCTTT TTTTTGGCGG TTGCGCTCCG
TATTTCGACG AGTTCTTCCG ACGCCATCTC GACGTCCACA CGTCGGACAT ATTGGCCGAC
AGCCTGCGCC TGCTCAATTT TTTCGACGTG ACCCCCGCGC TTCTCCCCGG TGAGCGGTGC
TGCGGGCACG ACCTGCTCTG GTCCGGGGAC CGGGAGAATT TCCTGCGCCT GGCGCGGTTG
AACGTGGAGG CCATCGAGAA GATGGGCATC GAGGAGGTCG TGACGGCGTG CCCCGAATGC
TACCGGTCGT TCGCGCGCGA TTACCCTGAA AACGGCGTCC CGGTGAACTT CCGCGTGACG
CACATCTTCG ACCTGGCGGA AAAGGAGATC GACAAGGGGG CCGTCGGCTT CGAGGCGCTC
GACCGCAGCC TCACCTTCCA GGACCCGTGC CGTTTATCGC GCATGGAGGG TCGTGCGGAC
CTGCCGCGCA AGCTCATCGA CCGGCTGCGG GTCAAAGGTT TTCGCGAGAT GCAGGACCGG
GGCGTTTCCG CCCTGTGCTG CGGCAACTGT GCGTGGACCG GATGCGACGG CTACACCAAG
GCGCTGCAGG TGAAGCGGCT GAGGCAGGCC CGGGCCACCG GGAGCGATCT GCTGGTGACG
GCCTGCCCCA AGTGCCAGAT CCACCTGCGC TGCGCAATGG AAGACCCCCT GCTCGGGAAG
GAGATCGGGA TGGACTTGAT GGACCTGACC AGCGTGATCG CCAGGACCAT CCGTTGGGAG
TAG
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| Protein sequence | MTFTRDFDET SRGMDELKIV LFVCNWGPHA ALQTLQDQDR DIPHQVRMIR IPCTGRISKT
LLFKAFERGA DGVALIGCTP GTCRYGAGTY TAERNVEGAR GILDLLGLGK DRLRLATFLP
EEASPLLDFL NDFTDQVRGM GKSPVTPVPL KQPAHDGRRN TAEVLKAHDV YACQDCGKCS
SACPMALSGR PYSPRAIANS IIAGSGNTPA VVNDVWSCLT CGICYDRCPS AVDFPAFIRE
MRCVQKASGK SGHEAHEGFF QSLMRAMTSP DLRTQHWKCL PEGIRTDQQS KTLFFGGCAP
YFDEFFRRHL DVHTSDILAD SLRLLNFFDV TPALLPGERC CGHDLLWSGD RENFLRLARL
NVEAIEKMGI EEVVTACPEC YRSFARDYPE NGVPVNFRVT HIFDLAEKEI DKGAVGFEAL
DRSLTFQDPC RLSRMEGRAD LPRKLIDRLR VKGFREMQDR GVSALCCGNC AWTGCDGYTK
ALQVKRLRQA RATGSDLLVT ACPKCQIHLR CAMEDPLLGK EIGMDLMDLT SVIARTIRWE
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