| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0008 |
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| Symbol | carB |
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| ID | 4460157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 9364 |
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| End bp | 12606 |
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| Gene Length | 3243 bp |
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| Protein Length | 1080 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639700761 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_844147 |
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| Protein GI | 116747460 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.196188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGA GAACCGACAT ACGAAAGATA TTGATCATCG GATCCGGCCC CATCATCATC
AGCCAGGCGT GCGAGTTCGA CTACTCCGGG ACCCAGGCCT GCAAGGCATT GCGCGAGGAA
GGGTACGAGA TTGTCCTGAT CAACAGCAAC CCCGCAACAA TAATGACCGA TCCGGAAACG
GCCGACCGCA CCTATATCGA GCCGATCACG CCCGAAGCGG TGGCGAAGGT GATCGAGCGG
GAGCGTCCCG ACGCGCTGCT GCCCACCCTG GGCGGGCAGA CGGCCCTGAA CGTGGCGGTG
CGCGTGGCCG AAACGGGTGT GCTCGAACGT TTCGGCGTGG CTCTCATCGG AGCGAGTGTT
GAAGTCATCA AGAAAGCCGA AGACCGGGAA TTGTTCCGCG ATGCCATGAA GCGGATCGGG
CTGCGCGTTC CGGCCAGCGG CATTGCGCGT TCCATGTCGG AAGTGGAATC CATTGCCCGG
GAGATCGGTT TCCCGATCAT CGTGCGGCCT TCTTTCACGC TGGGCGGCAC GGGGGGCGGC
GTGGCCTACA ACCGGGAAGA ATTGAAGGAA CTGGCCCAGA GCGGGCTGGA TGCCAGTTTC
ATTCACACCG TCATGCTCGA GGAGTCGGTG CTCGGCTGGA AGGAATTCGA GCTCGAGGTC
ATGCGCGACT GCATGGACAA TGTGGTCATC ATCTGCTCCA TCGAGAACAT GGACGCCATG
GGCGTCCATA CGGGGGATTC GATCACGGTG GCTCCGGCCC AGACCCTGAC CGACCGGGAA
TATCAATTGC TGAGGGACGC CTCGATTGCG ATTCTGCGGG AAATCGGCGT GGAGACGGGG
GGGTCCAACG TCCAGTTCGC CATCAACCCC GCCGACGGGG AGATGGTCGT CATAGAGATG
AACCCCCGGG TCTCCCGGTC ATCGGCCCTC GCATCCAAGG CGACGGGGTT TCCCATTGCC
AAGATCGCCG CCAAGCTGGC CGTGGGGTAT TCCCTGGACG AGATCGCCAA CGACATCACC
CGGGAGACCA GGGCTTCGTT CGAGCCCACC ATCGATTACT GCGTGGTGAA AGTGCCCCGG
TTCACGTTTG AAAAGTTTCC CAGGACGGAG GATTTCCTTT CCACTTCGAT GAAGTCCGTG
GGCGAGACGA TGGCCATCGG CAGAACCTTC AAGGAAGCGC TCCACAAAGC CGTCCGGTCC
CTGGAGATCG GTCGCTTCGG ATTCGTCGAC CCGCCGGCGA ACGCGGACCG CGAATACATG
GAGCGTCTGA GGCAGAAGCT TCGCCGACCC AATTCCATGC GCCTTTTTCA GATCGGGGAA
GCCCTGAAGC TGGGCATGCC CATCGAAGAG CTGCACGCGC TGACTTTCAT CGACCCCTGG
TTTCTCCACC ACATCCGGCA GGTGCTGCTG CTCGAGGACG AAATCCGGGG CGACGCGGAC
CGCTCCGGTT TCCTGGACGA TCCCGAGCGG GTTCGTTACG CGAAGTCGTG GGGCTTTTCC
GACGTGCGGC TGGCCCAATT GAGCGGCTCG GACGAGGAAA CCGTCCGTCA GCTTCGGATC
AAACACGGCA TAAAGCCGGT CTACAAGCTG GTGGACACCT GCGCGGCGGA ATTCGAAGCC
TACACTCCGT ACTATTATTC GACCTACGAA ACCGAAGACG AAGCCCGGCC TACCGGGCGT
CCGAAGGTCG TGATCCTCGG GGGCGGACCC AATCGGATCG GACAGGGCAT CGAATTCGAC
TACTGTTGTG TCCACGCTTC TTTTTCCCTG CGCGAGGAGG ACCATGAGTC CATCATGGTC
AATTCCAACC CGGAAACCGT CTCCACCGAC TACGACACTT CGGACAAGCT TTATTTCGAA
CCGCTGACCC GCGAGGACGT GCTCCACATC CTCGATACCG AGAAGCCCAA AGGGGTGATC
GTGCAGTTCG GAGGGCAGAC CCCCCTGAAC TTGTCGGTCC CCCTTGAAAA GGCCGGGGCC
AGGATTCTCG GTACATCCCC CGACGCCATC GATCGCGCCG AAGACCGCAA GCGGTTCCAG
AAACTGTTGC AGAAACTGGG TCTCAAGCAA CCCCGCAACG CCACCGCGTT CACCTTGCGG
GAGGCCGCCG AGGCGGCCGG GCGGATCGGC TATCCGGTGG TGGTGAGGCC GTCTTACGTA
TTGGGCGGCA GGGCCATGGA AATCGTCTTC GACGCGGCAA TGCTGGAGAG TTTCATGAAG
ACCGCGGTGC ACGTATCACC GGGGCACCCC ATCCTGATCG ACCAGTTCCT CGAGGATGCC
GTCGAGATCG ATGTGGACGC CATCAGCGAC GGCACGGTGA CCGTGGTGGG CGGAATCATG
GAGCATATCG AGCAGGCCGG AATCCATTCG GGAGACAGTG CCTGCGTTCT GCCGCCCATG
AGCATCTCCC GAAGCATCCA GGAAGAGATC AGGCGGCAGA CCAGGCTGCT GGCGAAGGAA
CTGGGGGTCG TCGGGCTGAT GAACATCCAG TTCGCTCTGC AGAACGGGGA GATTTTCATC
CTCGAAGTCA ACCCGCGCGC CTCGCGGACC ATTCCATTCG TCAGCAAAGC CATTGGATTT
CCCTTGGCAA AGCTGGCCAC CAGGGTTATG CTGGGAAAGT CATTGAAAGA ACTGGGATTT
GACACGGAAG TGGAACCCGA ACACATCTCC GTCAAGGAAG CGGTATTCCC CTTTTCGCGA
TTCCCGAACG TCGACGTTCT GCTCGGCCCC GAAATGAAAT CGACCGGCGA GGTGATGGGA
ATCGGGAGCA CTTTCGGCAT TGCCTTCGCC AAAGCACAGG CGGCGGTGGG ATACGAGCTT
CCGACATCGG GCACCGTGTT TATCAGCGTG CACGATGCGG ACAAGCCGAA AGTGCTGTCC
GTGGCGCGCA AATTCGGCGA AATGGGATTC CAGCTGATCG CCACCGCGGG AACGGCCGAT
TTCCTGAACG GGAACGGGAT ACGAACCAGA CCGGTGTTCA AGCTAAAAGA GGGACGGCCT
CACGTCGTGG ATCGCATCAA GAACGGCGAA GTCCAGCTGG TGGTCAACAC CAGCATGGGC
AAGAAAACCA CTTCGGATTC GTACGAAATA AGACGAACGA CACTCATCTA CAACATTCCC
TACGCCACCA CGATCGCCGG CGCAAAGGCG ATGGCGGAAG CGGTGAGCGA GCTGCAGCGC
GGCGACTGGG ATGTGAGAAC GCTTCAGGAG TATCACCACC GGGAGCGGTC GAGAAGGCAG
TGA
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| Protein sequence | MPKRTDIRKI LIIGSGPIII SQACEFDYSG TQACKALREE GYEIVLINSN PATIMTDPET
ADRTYIEPIT PEAVAKVIER ERPDALLPTL GGQTALNVAV RVAETGVLER FGVALIGASV
EVIKKAEDRE LFRDAMKRIG LRVPASGIAR SMSEVESIAR EIGFPIIVRP SFTLGGTGGG
VAYNREELKE LAQSGLDASF IHTVMLEESV LGWKEFELEV MRDCMDNVVI ICSIENMDAM
GVHTGDSITV APAQTLTDRE YQLLRDASIA ILREIGVETG GSNVQFAINP ADGEMVVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGY SLDEIANDIT RETRASFEPT IDYCVVKVPR
FTFEKFPRTE DFLSTSMKSV GETMAIGRTF KEALHKAVRS LEIGRFGFVD PPANADREYM
ERLRQKLRRP NSMRLFQIGE ALKLGMPIEE LHALTFIDPW FLHHIRQVLL LEDEIRGDAD
RSGFLDDPER VRYAKSWGFS DVRLAQLSGS DEETVRQLRI KHGIKPVYKL VDTCAAEFEA
YTPYYYSTYE TEDEARPTGR PKVVILGGGP NRIGQGIEFD YCCVHASFSL REEDHESIMV
NSNPETVSTD YDTSDKLYFE PLTREDVLHI LDTEKPKGVI VQFGGQTPLN LSVPLEKAGA
RILGTSPDAI DRAEDRKRFQ KLLQKLGLKQ PRNATAFTLR EAAEAAGRIG YPVVVRPSYV
LGGRAMEIVF DAAMLESFMK TAVHVSPGHP ILIDQFLEDA VEIDVDAISD GTVTVVGGIM
EHIEQAGIHS GDSACVLPPM SISRSIQEEI RRQTRLLAKE LGVVGLMNIQ FALQNGEIFI
LEVNPRASRT IPFVSKAIGF PLAKLATRVM LGKSLKELGF DTEVEPEHIS VKEAVFPFSR
FPNVDVLLGP EMKSTGEVMG IGSTFGIAFA KAQAAVGYEL PTSGTVFISV HDADKPKVLS
VARKFGEMGF QLIATAGTAD FLNGNGIRTR PVFKLKEGRP HVVDRIKNGE VQLVVNTSMG
KKTTSDSYEI RRTTLIYNIP YATTIAGAKA MAEAVSELQR GDWDVRTLQE YHHRERSRRQ
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