Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0004 |
Symbol | |
ID | 4460153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3935 |
End bp | 4657 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639700757 |
Product | hypothetical protein |
Protein accession | YP_844143 |
Protein GI | 116747456 |
COG category | [S] Function unknown |
COG ID | [COG5345] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.766809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.6832 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTTTCG TGGACACCAT GATCAACCTG ATGGAAAACG AGCTCCACGG GCGTGTTCTT GGCTGGCGTC CCAACGATAT CATCGTCGGC CGCTTCACGG ACAACATCAA CAACTACCAG TTGGGGGTCC TGGAGGCGAT CCGGTTCACC ACCCTGCGTC TGAAAGACAG CCTGACGCGC ATGGGCGACG CCGATACCTA CGATCCCGAC CTCGAATATG CGTTGAACCT GTTCATGATC CGGGCGACCT CCTTCTGGTT TCCGACCGCG GAAGGGGAAT ACGACAAGGC CATCGAACAT CTCCGGAACT TCCGGGCCAA GCTGGAAAAG GGCCAGCGCA CCTTTTACTA TCGCAAGGAC AACCTCATTT CGCTGCTGTC CGTGTACAAG GACCTCCTGG GCAACGTGAA CAAGACTCTG GTCGTTTCTC CCATCAGCTG GTTCCAGGCC GATGATTCGT TTTACTACGC CAAGGGCGTG GCCCACGTGT GCTACGAGAT CCTCCGGGTC GTACGGGTCG GTTACCAGAA ACAGCTGGCT TCGACCATGT ACGGCATCGA GATGATGGAC ACGATCGTGC ATGAGCTCTA CCGGGTTGAG AATATAGATC CGTGGCTCAT TCTTGACAGC GACCTCGGCA GTCTCCTCGC CAACCATCGC GCCAACATCA ACGCGCCGCT CAGCGAGGCG ACCCACCTGA TGGGTATCCT CGCTCTGCTG TAG
|
Protein sequence | MTFVDTMINL MENELHGRVL GWRPNDIIVG RFTDNINNYQ LGVLEAIRFT TLRLKDSLTR MGDADTYDPD LEYALNLFMI RATSFWFPTA EGEYDKAIEH LRNFRAKLEK GQRTFYYRKD NLISLLSVYK DLLGNVNKTL VVSPISWFQA DDSFYYAKGV AHVCYEILRV VRVGYQKQLA STMYGIEMMD TIVHELYRVE NIDPWLILDS DLGSLLANHR ANINAPLSEA THLMGILALL
|
| |