| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1727 |
|---|
| Symbol | rpl4lp |
|---|
| ID | 4462920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 1871669 |
|---|
| End bp | 1872424 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639700746 |
|---|
| Product | 50S ribosomal protein L4P |
|---|
| Protein accession | YP_844133 |
|---|
| Protein GI | 116755015 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0088] Ribosomal protein L4 |
|---|
| TIGRFAM ID | [TIGR03672] 50S ribosomal protein L4P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.526326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCTA AGATTATCGA CATATCAGGA AATCCGGTCG GCGAGATTGT GCTACCGGCG
ATCTTTGATG AGGAGTACAG GCCGGATCTC ATAAAGAGGG CTGTGCTTGC AGCACAGGCC
AACAGACTGC AGCCCTATGG GCCACATTTC TACGCTGGTA TGAACACCTC AGCCAGATCG
TGGGGACCGG GCCATGGAGT ATCCAGGGTG CCGAGGATTG TTACAGGAAG AAGAGCCGCT
GCTGTTCCCA TGGCAAGAGG CGGGCGTGCA TCCCATCCTC CAGTGCCATC AAAGGTCCTG
AGCGAGAAGA TCAACGAGAA GGAGAGGATC AAGGCGATAA GATCTGCTGT GGCTGCGACG
GCGAAGCCGG ATATTGTGGC AGCCAGGGGA CATCTCTTCA GTGGCGAGCT GCCGATAGTG
GTGAGGGGCG AGATCGAGAG CATATCAAAG ACCTCAGAGC TGAGGAGGTT TCTGATGGCT
GCGGGCCTCT GGGATGACGT TATGAGGGCG AAGAACGGAC GGAAGGTGCG GGCCGGAAAG
GGCAAGATCA GAGGAAGAAG GTTCAGGCAG CCCAGGAGCA TTCTGATCGT GGCAGCGGCC
GATAATGGTA TAGGAAGAGC TGCGCGCAAC CTTCCAGGAG TCGATTTCGT GACCGCTGAT
AGACTGAATG CTGAGCTTCT GGCGCCGGGG ACCCACGCTG GAAGGCTTAC AGTGTGGAGC
GAGCCATCCC TAAAGGTTCT GGAGGAGAGA CTATGA
|
|---|
| Protein sequence | MNAKIIDISG NPVGEIVLPA IFDEEYRPDL IKRAVLAAQA NRLQPYGPHF YAGMNTSARS
WGPGHGVSRV PRIVTGRRAA AVPMARGGRA SHPPVPSKVL SEKINEKERI KAIRSAVAAT
AKPDIVAARG HLFSGELPIV VRGEIESISK TSELRRFLMA AGLWDDVMRA KNGRKVRAGK
GKIRGRRFRQ PRSILIVAAA DNGIGRAARN LPGVDFVTAD RLNAELLAPG THAGRLTVWS
EPSLKVLEER L
|
|---|
| |