| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1702 |
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| Symbol | |
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| ID | 4462662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | - |
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| Start bp | 1858558 |
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| End bp | 1859523 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639700721 |
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| Product | putative rRNA pseudouridine synthase |
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| Protein accession | YP_844108 |
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| Protein GI | 116754990 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00425] rRNA pseudouridine synthase, putative
[TIGR00431] tRNA pseudouridine 55 synthase
[TIGR00451] uncharacterized domain 2 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.438885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGCGTG AGGGCTCCAC GAATTCATCT TATGGCTGCT TTCCAGATAG ACGACCTCTC
CAGGAGCATC TAAGGCTCGG CGCGATAAAT CTCGACAAGC CCTCGGGGCC GACGAGCCAC
GAGGTCGTCG CCTGGGTCAA GAGGATTCTG GGGCTGGAGA AGGCAGGGCA CAGTGGCACC
CTGGATCCGA GGGTGACAGG CATACTGCCG GTGCTCACCG GTGATGCGAC ACGGGTTGTG
GAGTTTTTGC TCACAGCCGG CAAGGAGTAC GTCTGTCTGA TGAGGACTCA TGAGCAGGTC
CCCAGGAAAA AGATCCTGGA AGTCTGTGAG GAGTTCTCGG GTGAGATATA CCAGAGGCCC
CCACTGAAGT CGAGCGTCGC CAGAAATCTG CGAACCAGGA AGATATACTA CATCGATGTC
CTGGAGATCG AGGGCCAGAG GGTGCTGATG AAGGTCGGAT GCGAGGCCGG AACGTACATC
AGAAAGCTAT GCTACGACAT GGGGCTCGCG CTGGGATGCG GCGCAAACAT GGAGGAGCTG
CGAAGGACAA AGGCCGGGCC ATTCGCGGAG GACGAGACTC TCGTCACGCT GCACAATCTC
AAAGATGCGT ACGAGATCTG GCGCGAGAGC GGGGATGAGA GCGCTCTGAG GAGAGCTGTT
CTGCCGGTTG AGAGGGCCCT CAGGCATCTT CCCGGTCTCG TAATATCTGA TAATGCAGTT
GATGCGATCT GCCACGGCGC ACCCCTGGCG GCTCCGGGTC TGTTGAGCCT GGAAACAGAT
ATAAACAAGG GTGATTTCGT TGTTATCTAC ACCCTCAAGG GTGAGGCGGT TGCAATCGGC
AGGGCGAAGC TCTCGAGCGA TGAGATGATG GTGGCGAAGA GCGGAATAGT CGCGTCGACC
GAAAGGGTGA TAATGGATCC CGGTGTTTAC CCAAGACGCT GGAAGCACAG TGCCGAGGTC
GTCTAG
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| Protein sequence | MRREGSTNSS YGCFPDRRPL QEHLRLGAIN LDKPSGPTSH EVVAWVKRIL GLEKAGHSGT
LDPRVTGILP VLTGDATRVV EFLLTAGKEY VCLMRTHEQV PRKKILEVCE EFSGEIYQRP
PLKSSVARNL RTRKIYYIDV LEIEGQRVLM KVGCEAGTYI RKLCYDMGLA LGCGANMEEL
RRTKAGPFAE DETLVTLHNL KDAYEIWRES GDESALRRAV LPVERALRHL PGLVISDNAV
DAICHGAPLA APGLLSLETD INKGDFVVIY TLKGEAVAIG RAKLSSDEMM VAKSGIVAST
ERVIMDPGVY PRRWKHSAEV V
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