Gene Mthe_1633 details

Gene Information

• Locus tag: Mthe_1633
• ID: 4462505
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: +
• Start bp: 1777698
• End bp: 1778216
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 639700652
• Product: XRE family transcriptional regulator
• Protein accession: YP_844040
• Protein GI: 116754922
• COG category: [K] Transcription
• COG ID: [COG4800] Predicted transcriptional regulator with an HTH domain

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCACG CCGACAGGAT CATCAGGGCT GCATTCCAGT CGGACGAGGC TCTGAGAGAT 
GCGATACGAT CGGTCATTTC AGAGATGGGA ATGAGCGCGA GGGAGTTCAG CAGAATCTCA 
TCCATACCAC AGAGCACTCT TTACAAAATA CTCTCAGGGC ACCGGGAGCC GAACATAACG 
ACGCTCCGGC AGATTGTGAG GACCATTCGT GATCTTGAGG GCGGAGGCGA GAGGTTCATA 
GCGATAATAG CTGCTAGGCC TGTTCTTGAC AAGATCGAGG AGACCAGGAT GCGCATCGGG 
GATAAGGTCT TCACGCTCCG CGAGTACTCT GCGACAAATA TCGAAGAGGC GATCATCGCA 
GCGGTGAGGG CGGAATCTGA TGGCGCAGCT GCAGTGGTAT GTGCGCCGAT TGTAAGCCCG 
ACGGTTGAAA AGCTTCTCAC GATACCTGTC GCCACGATAA TACCGAGGGA GAGCGTCAGG 
AGAGCGATAG AGGTCGCAGC AAAGAAGATA GAGGTATGA 

 

Protein sequence

MSHADRIIRA AFQSDEALRD AIRSVISEMG MSAREFSRIS SIPQSTLYKI LSGHREPNIT 
TLRQIVRTIR DLEGGGERFI AIIAARPVLD KIEETRMRIG DKVFTLREYS ATNIEEAIIA 
AVRAESDGAA AVVCAPIVSP TVEKLLTIPV ATIIPRESVR RAIEVAAKKI EV