Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_1626 |
Symbol | |
ID | 4462203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | - |
Start bp | 1768252 |
End bp | 1770951 |
Gene Length | 2700 bp |
Protein Length | 899 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639700645 |
Product | periplasmic copper-binding |
Protein accession | YP_844033 |
Protein GI | 116754915 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3420] Nitrous oxidase accessory protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0959099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTGTG CCTTTTGTAC ACAATCATCG GCTCAGCTCT CTTACATGGA CTCGCTGACA GGAGACCTGC TCTATTCGGA CGACTTCTCC AATCCAGCGA GTGGATGGCC ACGGGTGACG ACAGAGAGCT ACACGAGGGA CTACATGAAT GGGATGTACC ACATCTCTGT CAACACCTCT CACACCGTGA AAAATACCAA AGTGCCTGCA GGAATGGATT TCAGCGATTT CGTGCTCGAG ACGATGGTAT ATGTGGTGGA CGTGCCGGAG TATGGGGAGT TCGGGCTGAA TCTCAGAAAA GATGTGGAGA ATGACGATTT TTACAGGCTT GTGCTGAACA CCAATCACAA GTTCGCATTC TTTAAATATA AAAATGGAGA GTGGGCGGAT CTCATACCCT GGTCAAGGTC AGATGCAGTG GCGCTGGATG CGAACAAAAT AAAGGTGGTG GCATCCGGAG AGGACTTCAC GATCTGCATA AACGACCGGT GGGTTGGAAG CTGCAAGGAC GGGAGCATAC GCTCTGGGGT CATAGATATT TTAGGAGAGA CGCAGGATGC ATCGCAAGCA CACGTCGCAT TCGATTACCT GAAGATATGG TCCATCATGG GCGCATCAGA GGGTCAGATA CCGGAAAGCA GAAACATCCT GACGGTTGGT ACAGGGAAGC AGTACTCGCG GATCCAGGAC GCCATCAATG CCTCCACTGA CGGAGACACG ATCGAGGTCT ATTCTGGCAC GTACAGGGAG AACATCTTTG TCGACAGGAA ACTCACGATA CGCGGCATCG GTACGCCTGT AATAAATGCT GACAGGCGCG GCGATGGCAT CACGATATCT GCGGATGGAG TCGCTCTTGA GGGGCTGAGC GTGATCAATG CGAGGGGTGG ATTTCTCGGA TACTCCGGAA TAATGGTCTA CTCCAGCAGC AATATCATAA GAAACAACAG TATAACGCTA TGCGATAAGG GGATCGAGCT GTACGAGGCA GACAGCAACC TGATCGAGGC GAATATCATA GAGGACAACG ATGACAATGG GATATACCTC CTGAGCGGAT GTGATGAGAA CACGATAAGG GGCAACAGGA TATCGAGGAA CGGCGGCGAT GGGATACATG TTTACGAGTC TAATCGGAAC ATGATATTCA GCAACATTAT TGCAGATAAC ATCGGTGATG ATGCATACGA TGATTACAAC GCCACAGAGC TTGGGACCGG CGACGTCAAC AGATGGGATG ACGGATCGAA AGGCAACTAT TACAGCGATA ACCTCTGCAC AGACTCGAAC CGCGACGGGA TCTGCGACTC TCCGTATGGC ATTCCAGGCG GTGATTGCAT TGACAGATAC CCGCTTGCAT CGCCTTCACC CGGCCCCAGC GTGATAGAGG AGCGCCCACC AGAGGAGCCC TTGGAGGGAA GCAGATCCGC CACCGTTTCA GGTACCCAGT CCGGCTCTGT ATCGCTTGGT GGTGCTGCTG TTGATATACC CTCAGGATCC ATTCCGCCCA ACGAGGATGG AACTCCAGGA ACAATGGTCA TCAGCATAGA GAAGACGAAT ATGAGGCCAG AGCTGGCTGA GGGTCTGTCT CTTGTTGGCG AGGTCTACCA GCTCGGTCCT GAGGGCACAG TATTTGAGAG ACCGGTGCAG ATCACACTGA GGATACCTGA GGGGGTGGAT CCGAACACAA TCGTGGGAGT GACGACCTTC AACGCCACAT CTGGGAGATG GGAGCTGATA CCAGGCACAG TCGATCCAGA TGAGAGGACT GTCACGATAT TCACGGATCA CTTCTCACCA TACGCCCTGG TCAGGGGAGC CGATGAATGG ATGAGGAGAA ACGGCGGCTG GATCGAGGTG GTCAACAAAC ACCGCTACAA CACCATTTCC TATCTCCCAT GCAATGGTGA GGATCGCTGC AGTATTCTTC CGACACACAC AGAGCACGGT ATATGCATAC AGAATGCGGT TTTCAGAGAT GCATCCGTGG CGGGCCTCTG GACTCCCCCG AACAACTGGA TGATACTGGC ATTTGACGTG CCGGCTGAAA GCACAAGAAG CGAGACCAGA GAGCGCTTCT GGGTGCCTGC AGGCACATAC ACTCTGACCG AGTTTCTCTT CGTATCGGAG GTGAATCCTG GAGACCCCAT GTATTCCCCA TGCCGTCATG CAAAGTCCAA GCAGACGAAG GTTTACCAGA TAAACCCCGG AGATGTTATG CGGTTCGATC ATCTTGATGA ATCTTCACTC CAGGGGTCCC CGTGCTTCCT GGGTGGGTAT CCATGCAGGT CGGTTCTCGC TACTACTGCG AGGACCGGAA CGAAAACATC GGTCCACACA GGCGATGTAC AGGTCACCCT GACGTGGTAT GCGAACGCGG ACATCGACCT CTATGTGGAG GATCCAAATG GGGATTTGGT CTACTATGGC AATCCCCAGG TTCCGTCGGG CGGGCAGCTG GATCGCGACA ACATGTGTTC CAACTTCGAG ATGGGCAAGC CTGAGAACAT CTTCTGGCCG ACAGGCAGCG CGCCGCCCGG CGTGTATAAA GTCAGTGTGA ACTACTACAG CGATTGCGGC GGCGTCGGAG CGGTAAGGTG GACTGTGCGC ACGGTGGCCG GAGGGGACGT GAAGACGTAC ACAGGAGTTC TGAATACGGT GGGGGATACC CAGGAGGTCA CGACCTTCGA GATCCGATAG
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Protein sequence | MMCAFCTQSS AQLSYMDSLT GDLLYSDDFS NPASGWPRVT TESYTRDYMN GMYHISVNTS HTVKNTKVPA GMDFSDFVLE TMVYVVDVPE YGEFGLNLRK DVENDDFYRL VLNTNHKFAF FKYKNGEWAD LIPWSRSDAV ALDANKIKVV ASGEDFTICI NDRWVGSCKD GSIRSGVIDI LGETQDASQA HVAFDYLKIW SIMGASEGQI PESRNILTVG TGKQYSRIQD AINASTDGDT IEVYSGTYRE NIFVDRKLTI RGIGTPVINA DRRGDGITIS ADGVALEGLS VINARGGFLG YSGIMVYSSS NIIRNNSITL CDKGIELYEA DSNLIEANII EDNDDNGIYL LSGCDENTIR GNRISRNGGD GIHVYESNRN MIFSNIIADN IGDDAYDDYN ATELGTGDVN RWDDGSKGNY YSDNLCTDSN RDGICDSPYG IPGGDCIDRY PLASPSPGPS VIEERPPEEP LEGSRSATVS GTQSGSVSLG GAAVDIPSGS IPPNEDGTPG TMVISIEKTN MRPELAEGLS LVGEVYQLGP EGTVFERPVQ ITLRIPEGVD PNTIVGVTTF NATSGRWELI PGTVDPDERT VTIFTDHFSP YALVRGADEW MRRNGGWIEV VNKHRYNTIS YLPCNGEDRC SILPTHTEHG ICIQNAVFRD ASVAGLWTPP NNWMILAFDV PAESTRSETR ERFWVPAGTY TLTEFLFVSE VNPGDPMYSP CRHAKSKQTK VYQINPGDVM RFDHLDESSL QGSPCFLGGY PCRSVLATTA RTGTKTSVHT GDVQVTLTWY ANADIDLYVE DPNGDLVYYG NPQVPSGGQL DRDNMCSNFE MGKPENIFWP TGSAPPGVYK VSVNYYSDCG GVGAVRWTVR TVAGGDVKTY TGVLNTVGDT QEVTTFEIR
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