Gene Mthe_1604 details

Gene Information

• Locus tag: Mthe_1604
• Symbol: cdc6
• ID: 4462035
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: +
• Start bp: 1747337
• End bp: 1748458
• Gene Length: 1122 bp
• Protein Length: 373 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 639700622
• Product: cell division control protein 6
• Protein accession: YP_844011
• Protein GI: 116754893
• COG category: [L] Replication, recombination and repair; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1474] Cdc6-related protein, AAA superfamily ATPase
• TIGRFAM ID: [TIGR02928] orc1/cdc6 family replication initiation protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00370034
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGATG ACATGCTTCT CTGGGATGAG ACGCTTTTCA AGGACCCTGA GGTTTTCGAG 
CTGGATTACG TGCCGGAGCA TTTCGATCAC AGAGATGCCC AGATGAAGAG CCTGAGGTTC 
TGCGTGCGTC CAGCCCTTCG CGGAGCCAGG CCTGTGAACG CGCTCTGCCT GGGTCCACCA 
GGTACCGGCA AAACGACCGC GATAATTAAG CTGTTCGAGG AGATCGAGAA GCACACGAGA 
AGCGTGATAC CTGTGCACAT CAACTGCCAG ATAGACGGGA CACGCTACAG CATATTCTCC 
AGGATATACA AAAAGATCTT TGGTGTCACA CCACCCTCAA GCGGCATCTC ATTCAAGCGT 
CTCTTCGATA AAATAGCAAG CACGCTCGCA TCAAGGGAGG CGGTCCTGAT CGTTGCTTTG 
GATGATGTCA GCTACCTCTT CCCGGAGAAG GAGATCGATC ACATCCTTTA CACGTTTCTC 
AGATCCCATG AGTCGCTGCC CGGATTCAGA GCAGGCGTGA TAGTCGCACA CAGTGAGACC 
TCCCTGAGGT ACATCCTGGA TCACAGGGTG GAGTCGGTCT TCAGGCCGGA GGAGATCCAG 
TTCCCTCCGT ACAAAAGAGA TGAGATATTC GCGATACTAT CTCGAAGGGC TCAGCTCGGA 
TTCTATCCAG GCGTTCTGTC CCGGGACGTG CTCGATGTCG TGGTGGATCT CACCGCAGAA 
TCCGGCGATC TCAGGGTGGG GATAGATCTC CTCAAGCGCT CCTGCCTCGA GGCGGAGAGA 
CGGGCATCCA GAAGCATATC AGAGGATGAT GTGAAAAAGG CGTTCGAGAG ATCCAGGTTC 
CTACATCTCG AGCACGTGCT CAGATCGCTG AGCAGGGATG AGAGGACGCT GCTGAGGATC 
GTTGCAGAGC AGCCTGAAGG CAAGGCGCAG TCAGGAGAGC TCTACAGCAT CTACCATGAG 
GTCGCACACT CGGGCTACAC CAAGTTCTAC GAGATCCTGA AGAGGCTGGA GGCCCTGAGG 
CTTATAGAGA CGAGCTTCAC CGGATCCGGC ATGCGGGGAA GGAGCAGGAT CATACGCCTG 
AGATATGATC CCACAGAGGT GCTCACCAGA ACCGAAGGGT GA 

 

Protein sequence

MKDDMLLWDE TLFKDPEVFE LDYVPEHFDH RDAQMKSLRF CVRPALRGAR PVNALCLGPP 
GTGKTTAIIK LFEEIEKHTR SVIPVHINCQ IDGTRYSIFS RIYKKIFGVT PPSSGISFKR 
LFDKIASTLA SREAVLIVAL DDVSYLFPEK EIDHILYTFL RSHESLPGFR AGVIVAHSET 
SLRYILDHRV ESVFRPEEIQ FPPYKRDEIF AILSRRAQLG FYPGVLSRDV LDVVVDLTAE 
SGDLRVGIDL LKRSCLEAER RASRSISEDD VKKAFERSRF LHLEHVLRSL SRDERTLLRI 
VAEQPEGKAQ SGELYSIYHE VAHSGYTKFY EILKRLEALR LIETSFTGSG MRGRSRIIRL 
RYDPTEVLTR TEG