| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1591 |
|---|
| Symbol | |
|---|
| ID | 4461919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 1723077 |
|---|
| End bp | 1724210 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639700612 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_844001 |
|---|
| Protein GI | 116754883 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0970823 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGACA AGATTGATGA AATGGATGTT GCCTATGTGC AGGGAATAAT TGACGGGAAA
ATGGAGCCTA CAATGCTATC TGATGCCAAT TGTGATGGTA AAATCGATTT TGAAGATATT
GATCAAATAA ACGCACTCAT AAAAGACGAG GCAAAGTTTT TGATAGTTGT TGACTCAGTT
GGCAGAAATG TAACTATAAA GCTGCCTATA AATAAGCTAA TTGCTCTGGG AAGCTACAGA
ATCGAAGCTG TGAAGATTCT GAATGCTGAG AACAAAGTTG TAGGCATCTC ATCGGATATT
CCAGATAAGA ATTACTACTA TCCTGAGTTG ATCGAAAAAC CACTTGTTGG AACTTGGTCT
TCTCCAGATA GTGAGACAAT AGTGGCGCTT TCACCAGATA TTGTTATCAC TTCTGCGAAC
CTCCAACGAG CAACTAATTT AGAGAACGCT CTTAAATATG CAAATATTCC CGTGATCGGC
CTCGATTTCT ATAGAGACGA TATTATAAAG TCAGAGATTA GAACGCTCGG ATTTATCCTA
AACAAAGATG ATGAAGCAGA GAGGTATATA AAATGGCGCA GAGGATACGA ACAAACAATC
ACCGATTATG TAGCAAAGCT TGAGGACAAC GATAAGCCAC ACGTCTTCAT GGAATGGGGC
ACAAAAAATA CTGCTTCTGA GATCTCAAGT TACGGTCGAG GAAGTAGCGG AGATGCTGTT
TGCAGATTCA CTGGTGGTAT AAATATAGCA GCAGACCTCC CCGAGTATCC CAAGGTGGAT
AGCGAATGGG TTTTGGCTAC GAATCCAGAT ATAATAATAA GAATGTTAGC ACCAGGTGGA
GAGAAGCCAG GGTGGAATAA TACAGAGGAG ACAGCTTCAA TCCTCAAAAA CTATATAGAG
AGCAGGCCTG GATGGACAAA TCTTGAAGCG GTTAAGAACA ACAGAGTTCA TCTGCTCAGC
ACGGAAATTG CTTGGGGGCC AGATTCGATA GTTGGAGTCG CCTACTTTGC CAAATGGCTT
CACCCATCAA TAGATATCGA TCCTATGAAA ATCTACATGG AGTATCTCGA AGATTTTATG
GACCTGAGAT ATTCAGAGGA GGATATAGGC GTGTTGGGTT ATCCAACAAA GTGA
|
|---|
| Protein sequence | MDDKIDEMDV AYVQGIIDGK MEPTMLSDAN CDGKIDFEDI DQINALIKDE AKFLIVVDSV
GRNVTIKLPI NKLIALGSYR IEAVKILNAE NKVVGISSDI PDKNYYYPEL IEKPLVGTWS
SPDSETIVAL SPDIVITSAN LQRATNLENA LKYANIPVIG LDFYRDDIIK SEIRTLGFIL
NKDDEAERYI KWRRGYEQTI TDYVAKLEDN DKPHVFMEWG TKNTASEISS YGRGSSGDAV
CRFTGGINIA ADLPEYPKVD SEWVLATNPD IIIRMLAPGG EKPGWNNTEE TASILKNYIE
SRPGWTNLEA VKNNRVHLLS TEIAWGPDSI VGVAYFAKWL HPSIDIDPMK IYMEYLEDFM
DLRYSEEDIG VLGYPTK
|
|---|
| |