Gene Mthe_1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1555 
Symbol 
ID4462535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1690256 
End bp1691245 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content52% 
IMG OID639700576 
Producthypothetical protein 
Protein accessionYP_843965 
Protein GI116754847 
COG category 
COG ID 
TIGRFAM ID[TIGR03157] CRISPR-associated protein Csc2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00565642 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTACG AGGAGCTGAA AGACAAATTC GGAAAGAGCA TGGCTGAGGG GCTTGTGGAT 
GAGCTGACAA ATGAGCCGAG CGCTCATTAT GTTCACATCC TGCTGCTCAG GGAGCTCCAG
TCCAGCGCGA TCTTCACAAC CAACGGACAG GATGCAGATA TAGCAAATGT TGGAATACAT
GCGGAAGATG GGTTCGTGGA GTACTCGCCG GTGATGATGT TCAAGAGAAA GCAGACAGGA
AGCGATCGCA GGAAGGGCAA GGAGCTGCAG AGGAACCTGC TTGGGATAGA TGATACCATG
AGCGTCAACG AGATGAAGCA GGACTCCCCG GAGTCGATCC TCTACGGGAG CGCGGCCGGC
GAAGAGGCGA TCTCGGTGAC GTCCAGGGTT ATGTATGATA CAGCATATTC GATCAGGGAT
TCCAGCGTCC TTGTTGAGGA GAAATTCCAG AACGCCCCTG GGGATGCATT TGCAAAGGGC
GCGACGACTG CAATAAGAGA GCCGGACTTT ATCATGCCAG GAACGCTGTT CCCATGTGTC
GTGACACTGA GAGACGCGAC ATTCGAGGAG CTTGTCTTCG TGCTGGGTGT GACGAAGATG
AACAAGAGAT ACGGCGCAGC GACCTCCAGG ATTGGAAGAG TCGAGAACCA CATACTCGGG
ATATACTACG GGATAGAGGA GGGGCCGGCG AACCTGTACA TCTCACAGGA GATAGCGAGA
AGGCTGGCAG CCGTTGATGG GGGTATCACC ACTGATCGCC TGAGAAAGGT CCTGTACAGC
CCCACTCTTG ATGTCGAGGT TATCAAGGAT CTCACAAAAA AAGTGTTCGA TGAGAATATC
AAAGAGATGG ACATCGAGCA TCTTGATAAC GCGGACAAGC TTGTGAGCGC CATATCTGCG
GATATTGTAA AGGAGGCTCT GGAGATACAG AAGGAGAAGG CCTCAAAGTT TTTCAGCAGC
GTTAACTCCA AGGGAAGTAA GGGCGGGTGA
 
Protein sequence
MNYEELKDKF GKSMAEGLVD ELTNEPSAHY VHILLLRELQ SSAIFTTNGQ DADIANVGIH 
AEDGFVEYSP VMMFKRKQTG SDRRKGKELQ RNLLGIDDTM SVNEMKQDSP ESILYGSAAG
EEAISVTSRV MYDTAYSIRD SSVLVEEKFQ NAPGDAFAKG ATTAIREPDF IMPGTLFPCV
VTLRDATFEE LVFVLGVTKM NKRYGAATSR IGRVENHILG IYYGIEEGPA NLYISQEIAR
RLAAVDGGIT TDRLRKVLYS PTLDVEVIKD LTKKVFDENI KEMDIEHLDN ADKLVSAISA
DIVKEALEIQ KEKASKFFSS VNSKGSKGG