Gene Mthe_1474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1474 
Symbol 
ID4461929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand+ 
Start bp1583127 
End bp1583615 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content57% 
IMG OID639700493 
ProductTPR repeat-containing protein 
Protein accessionYP_843888 
Protein GI116754770 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0444734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTTA CATCATTCGC CTGGGCTTTG GCAGTGATGC TTGTGAGCGA AGCAGACACT 
GCAGAGGCCA GGAGATGGCT CGAGAAGGGC AACTCGCACT TCAACTCAGG AAGATACGAA 
AACGCTTTGG AGGCGTACGA TCGCGCCATA GGGCACGATC CAACAATCGT GGACGCATGG 
AACAACCGCG GCATCGCTCT CTCATACATG GGAAGATATG AGGACGCTCT GAAGAGCTAC 
GATGAGGCGC TCAGGCTCGA TCCGAACCAT GCGTTCGCCT GGAACAACAA GGGCATGGCC 
CTGGGATCGA TGAGAAGGTA CCAGGAGGCT CTCGCCTGCT TCGACAGGGC CCTCGAGATC 
GATGCGTACT TCATAGGCGC GTGGTACAAC AAAAGCCATG CCATGGCAGC TCTCGGCAGA 
GCAAGGGAGG CGCGGGCTGC GATGATCACA GCAAAGACCC TCGAGAGCGC AGCGAGAAGA 
TGCAGGTGA
 
Protein sequence
MMFTSFAWAL AVMLVSEADT AEARRWLEKG NSHFNSGRYE NALEAYDRAI GHDPTIVDAW 
NNRGIALSYM GRYEDALKSY DEALRLDPNH AFAWNNKGMA LGSMRRYQEA LACFDRALEI 
DAYFIGAWYN KSHAMAALGR AREARAAMIT AKTLESAARR CR