| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1469 |
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| Symbol | |
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| ID | 4461924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 1576014 |
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| End bp | 1577180 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639700488 |
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| Product | cytidine deaminase |
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| Protein accession | YP_843883 |
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| Protein GI | 116754765 |
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| COG category | [F] Nucleotide transport and metabolism
[S] Function unknown |
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| COG ID | [COG0295] Cytidine deaminase
[COG1478] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric
[TIGR01916] F420-0:gamma-glutamyl ligase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.127234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGAGA TCTTCGGGAT AAAGACCGGT CTTCTGAAGC CCGGCGAGGA TCACGTAGAG
GCTCTGAGGA GGGGGCTTGC TGAGGCAGGC ATCAGGCTCA GGGATAAAGA TGTGATCGTC
GTCTCTGAGA GTTTTGTTGC AACCGGGGAG GGGCGTGTAG TATCCCTTAA AGACATCACC
CCCAGTGCGC GTGCGATCGC TCTTGCCTCC AGGTACGAAA AAGACCCCGC AGAGATGGAG
CTGATACTCA GGGAGTCTGA TGAGATACTC GGGGGAATCC CTGGTGTGGT TCTGACACTC
AAGGATGGTT TTCTTTACCC AAATGCGGGA GTCGATCATT CGAATGCGCC TCCCGGGTAT
GTGGTCCTCC TCCCATCAGA CCCGAAGAGG GCAGCATCTA GAATAAGAAC TGAGCTCTCA
AACGGCGTCA GAATAGGCGT GATCATAGGC GACAGCAGAA CACATCCTCT CAGGCTTGGA
TGCGTCGGTG TTGCGCTCGC ATGCGATGGC ATCATACCTG TGGAGGATGC CCGCGGTAGA
AGGGACCTGT ACGGAAAACC CCTTCGTATA ACCGTCAAGG CTGTGGCAGA TAACCTCGTA
TCTGCAGCAC AGCTTGTAAT GGGCGAGGGG GATGAGGGAA TTCCTGCAGT TGTGATACGT
GGAGCGCCGG TCGAGCTCTC TGATTCGGGA CCTGCTGCAA TACCTAACAT ACCGCCGCAC
GAGTGCATGT ATATCGGCGT ACTGAGATCG ATACCGCGTC CCTACACAGG CGAGTACGAT
GATCTCATCA AATCCGCAAT CGATGCCAGG GACCAGGCAT ACGCCCCGTA CTCGAAGTTC
AGGGTTGGAG CTGCGGTACT GTGCGGAAGC GGGAAGATAT ACAAGGGCGC AAATGTCGAG
AATGCATCAT CTGGAGCAGG AATATGTGCT GAGAGAGTCG CGATGGCCAC CGCAGTGGCT
GCAGGGGAGC GAGAGTTCGT AGCGCTTGCT GTCGCTGGAG AACTGTCGAA GCCCATAACA
CCATGTGGCA TATGCAGGCA GATGATGATC GAGTTTGGCG ATATGGATGT TGTTATGGTG
GGATCAAATG GCGATGCGCT GATGGTGAGG GCAAGTGAGT TGCTGCCGGA TGCCTTCACG
TTATCATGCA GATCGGGATG TCCATAA
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| Protein sequence | MLEIFGIKTG LLKPGEDHVE ALRRGLAEAG IRLRDKDVIV VSESFVATGE GRVVSLKDIT
PSARAIALAS RYEKDPAEME LILRESDEIL GGIPGVVLTL KDGFLYPNAG VDHSNAPPGY
VVLLPSDPKR AASRIRTELS NGVRIGVIIG DSRTHPLRLG CVGVALACDG IIPVEDARGR
RDLYGKPLRI TVKAVADNLV SAAQLVMGEG DEGIPAVVIR GAPVELSDSG PAAIPNIPPH
ECMYIGVLRS IPRPYTGEYD DLIKSAIDAR DQAYAPYSKF RVGAAVLCGS GKIYKGANVE
NASSGAGICA ERVAMATAVA AGEREFVALA VAGELSKPIT PCGICRQMMI EFGDMDVVMV
GSNGDALMVR ASELLPDAFT LSCRSGCP
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