Gene Mthe_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1465 
Symbol 
ID4462408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1570067 
End bp1571809 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content48% 
IMG OID639700484 
ProductCl- channel, voltage-gated family protein 
Protein accessionYP_843879 
Protein GI116754761 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0038] Chloride channel protein EriC
[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGATATA CAATCCTCTT AGCGGCGTTT GTTGGTGCGA TATCCGGATT GGGTGCGTTC 
ATCTTCTACT TTCTCCTCGA GCTGTCGACG AGGGTGTTTC TGACAGGCTT GGACAACTAC
ACTCCTCCAA AAGCAGGAGA TGTGGAGTTG GTTAATATCG ACTTCCATAT CGGCATGCTT
CCCCTTCCCG CTGTCGTAAC ACTTGGAGGA CTTCTCAGCG GGTTAATAGT TTACAAATTC
GCTCCGGAAG CGGAAGGGCA TGGGACAGAT GCTGTCATCA GATCCTTCCA CAAAGCGAGG
GGGGCTTTGA GGGCAAGAGT GCCGGTTGTA AAAACAATAT CATCAGCAAT AACAATTGGA
AGTGGGGGGA GTGCTGGCAG GGAAGGGCCG ATAGCTCAGA TTGGGGCCGG TTTCGGGTCT
TTCGTTGCCG ATCTTCTGAG ACTATCGGAT AGGGATAGAA GGCTGCTTGT GGTGTGCGGA
GTTGCGGGTG GGATAGGGAG TATATTTCGG AGCCCTTTTG GGGGGGCGAT GTTTGGTATC
GAAGTGCTTT ACAAAAAGGA CTACGAGGTT GAAGCGATAG TTCCTGCATT TGTCTCTTCA
ATAGTTGCCT TCGTTACCTT CAATGTTGTA ACCAGTTACT TTGCAGGCAT ACCATTTATC
TCTCCGCCAA TTTTCAAAAT CCCTCAGCTT TCAATCCACT CTCCACTTGA GTTTCCTCTC
TACGCAGTGG TTTCAGTTTT GGCGGCTTTT TTTGGAGTTT TTTACATAAA GACCTTCTAC
ACCATCCGTG GTCTCTTTAA ATCCTCCAAA ATACCGCAAA CCCTCAAACC AGCTTTCGGC
GGACTCCTCA CTGGATCTAT CGGCATGCTT CTCCCAGGTG TTCTTGGAAT GGGGTACGGG
TACGTTCAAA TGGCCATAGA TGGGAAGCTG GCGCTCTCAG TGATATTCCT TCTGATTTTG
GGTAAGATCG CAGCCACGTC CTTTACAGTC GGTTCTGGTG GGAGTGGTGG TGTATTCGCG
CCATCAATTG TAATTGGAAG CATGGTTGGT GCCTTCATCG GATACCTTTT CCATCAACTC
TTTCCTGAAA TTGTTGTGCA GCCAGAAGCG TTTGTCCTTA TCGGCATGTC GGCCTTCATT
GCAGCTGTGG CAAAAACTCC TATAGCATCG ATTTTGATGG TTCTCGAAAT GTGTGGAAGT
TATATGATGC TGCCAGCTTT GATGATCTCC TCCGCGTTGG CCTACTGTCT TAGTGGTGAC
CACTCAATTT ACTCAGAGCA GGTTGCAACA AGAGCGGAAA GTCCGGCACA CAGGATGGAG
ATGTCAGTAG ATGTTCTTAA GGATGTGAGC GTGGATGAGG CGATGGTTCC GGCAGAGAAG
CTGGTCAGCG TCTCACCCAA CCAGAAGGTG AGCGAGGTTC TTGCTCTCAT AGAGAAAACG
GGACATATAG GTTTCCCTGT TGTTGAGAAT GGCATGCTGG TTGGAATCGT GACATTCAGG
GATGTCGAGA TGGTTCCGGT TGGAGAGAGG GAGAACAAGC TTGTTAAAGA CATAATGATG
AGGGACTTAA TTGTAACTTA CCCGGATGAG AGCTTAGAGG ATGCTCTGAT AAAACTTGTT
CAGAAAGATG TGGGGAGGTT GCCTGTTGTT GACAGAAAAA TGAACAGAAT GCTTTTAGGT
CTGATTACGA GAAGCGACAT AATCAAGGCC CATGCAAGAG AGGTGGCGAA ACTTAAAGAG
TGA
 
Protein sequence
MRYTILLAAF VGAISGLGAF IFYFLLELST RVFLTGLDNY TPPKAGDVEL VNIDFHIGML 
PLPAVVTLGG LLSGLIVYKF APEAEGHGTD AVIRSFHKAR GALRARVPVV KTISSAITIG
SGGSAGREGP IAQIGAGFGS FVADLLRLSD RDRRLLVVCG VAGGIGSIFR SPFGGAMFGI
EVLYKKDYEV EAIVPAFVSS IVAFVTFNVV TSYFAGIPFI SPPIFKIPQL SIHSPLEFPL
YAVVSVLAAF FGVFYIKTFY TIRGLFKSSK IPQTLKPAFG GLLTGSIGML LPGVLGMGYG
YVQMAIDGKL ALSVIFLLIL GKIAATSFTV GSGGSGGVFA PSIVIGSMVG AFIGYLFHQL
FPEIVVQPEA FVLIGMSAFI AAVAKTPIAS ILMVLEMCGS YMMLPALMIS SALAYCLSGD
HSIYSEQVAT RAESPAHRME MSVDVLKDVS VDEAMVPAEK LVSVSPNQKV SEVLALIEKT
GHIGFPVVEN GMLVGIVTFR DVEMVPVGER ENKLVKDIMM RDLIVTYPDE SLEDALIKLV
QKDVGRLPVV DRKMNRMLLG LITRSDIIKA HAREVAKLKE