| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1405 |
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| Symbol | |
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| ID | 4463028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 1506584 |
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| End bp | 1508020 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639700423 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_843820 |
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| Protein GI | 116754702 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.859929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCTG ATGTTCATAA GAAAGGAGAG GCTGCAGAAA TGACTGAGAG GAGTGTCGAA
CCTCCCGTGA GGCCTGCCAG GACCTCTTCT GTGAGAAAGA CCGGCCTGAT ATTCTTCCCG
GCATTCGACT GGGCCATATC CCCCACCCAT CCGGAAAGGG AGGAGAGGCT TCTCTACACA
AGAGACCAGA TCTTTGAAGA GGGACTTATG GACTTCCCGG AGATCGTCGA GTACAGGCCA
CGCCTGGCGG AGCTGAAGGA TGTTGCCAGG GTCCACTTCT GCGTTCCAGA TGTCCAGTCG
CAGGTGACCG AGGCGCACCT GATAGCAGCA GGCAGCACTC TGGTCCTCGC AGATGCTCTG
ATGAATGGAG AGATAAGAAA TGGCTTCGCT CTCGTGCGCC CTCCCGGCCA CCACTCGATG
AGGGTGGTCC ATGGGAACAG AGGCTTCTGC AACATCAACA ACGAGGCCAT AATGGTCGAG
TACATACGCA GGAAGTACGG CGTGAGGCGC ATCGCCATAG TCGACACAGA TGTGCATCAT
GGAGACGGCA CGCAGGACAT ATTCTGGCAC GATCCGGATG TGCTCTTCAT AAGCTTCCAT
CAGGATGGCA GGACGCTCTA CCCCGGCTCG GGATTCACCA ACGAGATGGG CGGGCCGCTC
GCTTTGGGAC GAACACTGAA CGTGCCGCTG CCTCCTGGTA CGACAGATGA GGGGATACTG
TACGTGCTGG AGAATCTTGT ACTCCCTGTG CTGGATGAGT TCGATCCGCA GCTCGTCTTC
AACTCAGCAG GCCAGGACAA CCACTACACA GATCCTCTAG CCAACATGAG GTTCACAGCT
CAGGGCTATG CCAAGCTGAA CGAGGTGCTC GCCCCGGATA TGGCGGTGCT CGAGGGCGGC
TACGCCATTG AGAGCGCACT GCCCTACGTC AACACCGGAA TCATCCAGGC GATGGCAGGA
CTCGATTACT CAAACGTGAA AGAGCCGGAC TATGTTCCGG ACAGGTTTGT CCTGACGTCT
GATATGAGGA GATCGATAGA GGCAACTGTG AACCATCTCC TCACAATCTG GGAGAGCAGG
GACGATCTCG TGGCCAAGGC GAGGCAGGAG CACGGCAGGT TTTATTCCCG GAGGAAGAGG
ATATTCTACG ATACAGACAT GATAACCGAG GGTCAGGAGG AGACGTTGAG GATGTGCACG
GATTGCCCTG GCTACCTCAC GATCTCCACA CAGGCTGCCA GGGGATACGG CCGGCTTAAC
ACAGCCTTCT GCGTCTCCGT ACCGCTCTTC GCATGCAGGA GCTGCATCGA GGATGCGCGG
GAGGAGTATG AGGAGCACAA ATCCGAGATG AAATATGACT ATGTGTACCT CCAGGACAGG
CCATCTGATA AATTCAGGGC GTACTGCACC AGAACCAGAA ACGAGATCGT TCTGTGA
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| Protein sequence | MAADVHKKGE AAEMTERSVE PPVRPARTSS VRKTGLIFFP AFDWAISPTH PEREERLLYT
RDQIFEEGLM DFPEIVEYRP RLAELKDVAR VHFCVPDVQS QVTEAHLIAA GSTLVLADAL
MNGEIRNGFA LVRPPGHHSM RVVHGNRGFC NINNEAIMVE YIRRKYGVRR IAIVDTDVHH
GDGTQDIFWH DPDVLFISFH QDGRTLYPGS GFTNEMGGPL ALGRTLNVPL PPGTTDEGIL
YVLENLVLPV LDEFDPQLVF NSAGQDNHYT DPLANMRFTA QGYAKLNEVL APDMAVLEGG
YAIESALPYV NTGIIQAMAG LDYSNVKEPD YVPDRFVLTS DMRRSIEATV NHLLTIWESR
DDLVAKARQE HGRFYSRRKR IFYDTDMITE GQEETLRMCT DCPGYLTIST QAARGYGRLN
TAFCVSVPLF ACRSCIEDAR EEYEEHKSEM KYDYVYLQDR PSDKFRAYCT RTRNEIVL
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