Gene Mthe_1393 details

Gene Information

• Locus tag: Mthe_1393
• ID: 4462059
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: +
• Start bp: 1487586
• End bp: 1489472
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 639700411
• Product: DNA gyrase, B subunit
• Protein accession: YP_843808
• Protein GI: 116754690
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGCGAGA CGATGTATGA TGCGAGTCAT ATCAAGGTGA TGGAGGGGCT TGAGGCGGTC 
AGGCACAGGC CCTCGATGTA CATAGGATCC ACAGATGTAC ATGGATTGCA CCATCTTGTT 
TATGAAGTGG TCGATAACAG TGTTGATGAG GCGATGGCCG GTTACTGCAA GGAGATATCC 
GTGGTCATCC ATGGAGACGG CTCGGTCTCA GTAAAGGATG ATGGTCGTGG CATTCCTGTC 
GATATTCATC CGCAGTACAA CCGGCCTGCT GTGGAGATAG TCATGACCGT GCTCCACGCT 
GGTGGGAAGT TTGACCACGA TACGTATCAC GTCTCTGGCG GGCTGCATGG CGTCGGAGTA 
TCTGTTGTCA ACGCCCTCTC AGAGTGGCTT GAGGTTGAGG TCAGCCGAGA GGGAAGGGTA 
TACAGGCAGA GATACGAGCG CGGCAGGCCC GTATCAGATC TCCAGGAGAC AGGCGTTTCT 
GAGAATACCG GAACCACCGT GAGGTTCAAG CCCGATCCCG AGATCTTTGA GGTCACCGAC 
TTCAGCTTTG ACGTTCTTTC ATCACGCCTC AGAGAGCTCG CATTTCTGAA CCGCGGTCTT 
AAGATCAGCA TAACTGATGA GAGGTCAGGC AGGAGCAAGA CGTTCCATTA TGATGGGGGA 
ATAATCTCCT TCGTCCAGTA CCTGAATAAA TCCAAGGAGG TGCTGCATCC AAACCCGATA 
TACTTCTCCA GGGTGCGGGA TGATGTATCG GTGGAGGTGG CGATGCAGTA CAACACGAGC 
TACAACGAGT CTGTGTTCAC CTTCGCGAAC AACATAAACA CCCGGGAGGG GGGAACGCAC 
CTCTCAGGTT TCAGAGCAGC GCTGACAAAA ACGGTAAACG ATTTTGTCAG GGAGAAGAAG 
CTTCTGAAGG GGGATGCAAA GCTCACAGGT GATGACCTCA GGGAGGGGCT GGTCGCTGTG 
GTCAGCGTTC GGCTCCCCGA TCCGCAGTTC GAGGGTCAGA CCAAGACGAG GCTGGGGAAC 
AGCGCGGTTC GTGGCCTAGT TGAATCCCTC GTGTCCGAGG GGCTGATGGA GTACTTCGAG 
CTGAATCCGC AGGTGGCCGA GGCGATCGTG GAGAAGGCGA CAGAGGCGAT GCGCGCCCGC 
GAGGCCGCCA GGAAGGCAAA AGAGATCACG AGGCGGAAGA CCGCGCTGAC ATCATCAGGG 
CTCCCGGGAA AGCTAGCAGA CTGCGTGGAG CGCGATCCCG CAAAGAGCGA GCTGTACATC 
GTAGAGGGGG AGTCGGCGGG TGGTTCTGCG AAGCAGGGCA GGAATAGACA CTTCCAGGCA 
GTCCTGCCGC TCAGAGGTAA GATTCTGAAT GTGGAGCGCG CGAGACTCGA CAAGATGCTC 
AAGAACGAGG AGATCAGGAA CCTCATAACA GCCCTCGGCA CCGGCATAGG TGATGATTTC 
GATATAACAA AAGCCAGGTA CCACAAGATC ATCATAATGA CAGATGCTGA TGTTGATGGA 
TCCCACATAC GCACGCTTCT CCTCACGTTC TTTTACAGAT ACATGCAGCC TCTGATAGAA 
GCTGGCTACG TCTACATCGC CCAGCCGCCG CTGTACCAGG TCAGAAAGGG GAAGAGCGTG 
AAGTACGCGT ACTCAGATGA GGAGCTCGCA AAGCTTCTGG AAGATGGCAA GGCTGTGGTC 
CAGCGGTACA AGGGCCTGGG CGAGATGAAC CCTGAGCAGC TATGGGAGAC CACGATGAAT 
CCAGAGAAGA GGACACTCCT CAGGGTGACG CTGAAGGATG CAGTCGAGGC TGATGAGATC 
TTCTCCGTAC TGATGGGGGA GCAGGTCGAG CCGAGAAGGG TCTTCATAGA GACGCATGCG 
AGAGAAGTGA GAAACCTGGA CGTGTGA 

 

Protein sequence

MSETMYDASH IKVMEGLEAV RHRPSMYIGS TDVHGLHHLV YEVVDNSVDE AMAGYCKEIS 
VVIHGDGSVS VKDDGRGIPV DIHPQYNRPA VEIVMTVLHA GGKFDHDTYH VSGGLHGVGV 
SVVNALSEWL EVEVSREGRV YRQRYERGRP VSDLQETGVS ENTGTTVRFK PDPEIFEVTD 
FSFDVLSSRL RELAFLNRGL KISITDERSG RSKTFHYDGG IISFVQYLNK SKEVLHPNPI 
YFSRVRDDVS VEVAMQYNTS YNESVFTFAN NINTREGGTH LSGFRAALTK TVNDFVREKK 
LLKGDAKLTG DDLREGLVAV VSVRLPDPQF EGQTKTRLGN SAVRGLVESL VSEGLMEYFE 
LNPQVAEAIV EKATEAMRAR EAARKAKEIT RRKTALTSSG LPGKLADCVE RDPAKSELYI 
VEGESAGGSA KQGRNRHFQA VLPLRGKILN VERARLDKML KNEEIRNLIT ALGTGIGDDF 
DITKARYHKI IIMTDADVDG SHIRTLLLTF FYRYMQPLIE AGYVYIAQPP LYQVRKGKSV 
KYAYSDEELA KLLEDGKAVV QRYKGLGEMN PEQLWETTMN PEKRTLLRVT LKDAVEADEI 
FSVLMGEQVE PRRVFIETHA REVRNLDV