| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1385 |
|---|
| Symbol | |
|---|
| ID | 4462051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 1479054 |
|---|
| End bp | 1479959 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639700402 |
|---|
| Product | tetrahydromethanopterin S-methyltransferase subunit E |
|---|
| Protein accession | YP_843800 |
|---|
| Protein GI | 116754682 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4059] Tetrahydromethanopterin S-methyltransferase, subunit E |
|---|
| TIGRFAM ID | [TIGR01113] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCAT TGAGCATGGG GCTCGTCGCT GCTATGGGGG CCCTTGCGAC CGTTGCTGGA
GCCAGCGAGG ATATTGAATC GGATGTTGGC TCACAGAGCA ATCCAAACTC GCAGGTCCAG
CTTGCTGCAC AGGTCGGAAA CCCCCACAGG ATATACAACA AGGCCATCTC AGGCGAGCCA
CCGGCGAACG CCCTTTGGGC TACAACCGCT GCTGTTGTGG CTTACACGCT GATAACAAAG
TTCGCAATGC CTGCGCTCTT CGCAATAGCC GTAGGCGCGT CAGTTGCAGC GCTCTTCAAT
GGAGTCTTCT CGACCAGCGC TTACTTCGGC AGGAACGCAA GCCAGCGCAG GTTCAATCAG
TGGATCTATC TGGACATAGT CCGTTACACG ACACCATCCA TAATGGCACA TGCATGGATA
ACGGCATTCT GCATAACATG TATAGCGTAC ATACAGACAC AGATTTTGAT GCCACATCAT
CCGTTCCCGA TGCCTGTTAT CGCTATGATC TGGGGAATAG CTGTTGGTGC GATCGGTTCT
TCTGTGGGTG ATATTCATTA TGGAGGCGAG CGTGAGTTCC AGTGGAGAAT CTTCGGCCAG
GGTCTCAACA CGATGCTCTC GGGCCAGATT GTCAGGAAGG CCGAGGCTGG GTTGAGGAAC
TCCATCGACA ACGCATGGTT CTGTGCCAAG CTTGGAGGTC CGTTTACAGG TCTTGCGTTC
GGTCTGGTGG TATTCCTGGA TAGCTGGCGC ACAACAGTCT TCGACCCGGT GACACAGTCC
GGTCTGGCAA TAGGCATGGG ACTGTTCTTT GTGATACTGA TGAATCTCTA CAACTACTAT
GTTGAGACCT CGGTGAGAAG AAAGTATGGT CCGTATCCAG GGTACAAGGG GGATATTCCA
GCATGA
|
|---|
| Protein sequence | MDALSMGLVA AMGALATVAG ASEDIESDVG SQSNPNSQVQ LAAQVGNPHR IYNKAISGEP
PANALWATTA AVVAYTLITK FAMPALFAIA VGASVAALFN GVFSTSAYFG RNASQRRFNQ
WIYLDIVRYT TPSIMAHAWI TAFCITCIAY IQTQILMPHH PFPMPVIAMI WGIAVGAIGS
SVGDIHYGGE REFQWRIFGQ GLNTMLSGQI VRKAEAGLRN SIDNAWFCAK LGGPFTGLAF
GLVVFLDSWR TTVFDPVTQS GLAIGMGLFF VILMNLYNYY VETSVRRKYG PYPGYKGDIP
A
|
|---|
| |