| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1347 |
|---|
| Symbol | |
|---|
| ID | 4462843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 1449823 |
|---|
| End bp | 1451067 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639700363 |
|---|
| Product | citrate transporter |
|---|
| Protein accession | YP_843762 |
|---|
| Protein GI | 116754644 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATCTCAA CGCTGATTCT TCTTCTGGTT CTCGTGCTCA TAGCGTTCAG GCAGGTCGGC
GGGATCAGGC TTAAGATATG GCAGATAATG ACAGGCGGAG CTATTGCTGC TGTCGCGCTC
GGCGAGATAT CCCCCGTGGA TGCCATAAGA TCGATCAACG CAGATGTAAT GATCTTTCTC
GCGGGCATGT TCGTGGTCGG GGAGGCGATG CGCCAGAGCG GCTATCTATT CTACCTCACG
AACAGGCTCT TCGGAAGAGC TGACAGCACA GATGAGCTTC TCATAATGCT GCTATTTGGG
ATGGGCATGC TCTCTGCGTT TCTCATGAAC GACACCATAG CGATAATAGG CACCCCTGTG
GTGCTTTACC TCTCCAGGCT TCACAGAGTG GCGCCCGCCC TCATGCTCCT CTCGCTGGCG
TTCGCCGTGA CAATAGGAAG CGCGATGAGC CCGATCGGCA ACCCGCAGAA CCTGCTCATA
GCGATCGACG GTGGGCTGGA TAATCCCTTC GCGGACTTCT TCGGCAATCT GTTCATACCT
ACATGCATCA ACCTCTTCAT AGTCTATCTC CTGATGAAGG CCTTTTACAG GAATGAGTTC
AGGAGGCTGG ATCAAATACA CGTGAGTTGT TCGCTCAGCG ATGAGAATCT CGCACGAGTG
TGCAGGATCT CCCTCGCCAC GATAGTGGTT CTCATACTCC TGAAGATAGT GGCCGTGATG
TTGGGCGCAG GGGAATCGTT CAGGCTGACG TACATTGCGG TGGCAGCAGC TCTCCCTGTC
ATCACCCTGA GCAACCGGAG GTGGGAGATG CTCAGGGGCA TTGACTGGGA GACGCTGATA
TTCTTCGCAT CGATGTTTGT TCTTATGGAG GCTGTGTGGA GATCGGGCTT CATCCAGGAG
TCTCTGAGTC TGGAGAGCGA TGGCATCGCC TCCGTATCCA TGGTTCTCGG GCTGAGCGTC
ACACTGAGCC AGCTGGTCTC AAACGTGCCC TTTGTCGCCC TGTACCTGCC AGTGCTCGAT
CAGATCGGGG CGACTGCCCA GACGATGGTT GCGCTGGCAG CTGGAAGTAC TATCGCAGGC
AACCTCTCGG TACTTGGAGC TGCGAGCAAT GTCATAATAA TTCAGAACGC AGAGAAGGAT
GGAGCCACGA TAACATTCCT TGAGTTCGTG AAGGCGGGGA TCCCTCTCAC AGCAGCGAAC
CTGGCCGTGT ACTGGCTCTT CCTGGAGATC TGGCCTGCTC TGTGA
|
|---|
| Protein sequence | MISTLILLLV LVLIAFRQVG GIRLKIWQIM TGGAIAAVAL GEISPVDAIR SINADVMIFL
AGMFVVGEAM RQSGYLFYLT NRLFGRADST DELLIMLLFG MGMLSAFLMN DTIAIIGTPV
VLYLSRLHRV APALMLLSLA FAVTIGSAMS PIGNPQNLLI AIDGGLDNPF ADFFGNLFIP
TCINLFIVYL LMKAFYRNEF RRLDQIHVSC SLSDENLARV CRISLATIVV LILLKIVAVM
LGAGESFRLT YIAVAAALPV ITLSNRRWEM LRGIDWETLI FFASMFVLME AVWRSGFIQE
SLSLESDGIA SVSMVLGLSV TLSQLVSNVP FVALYLPVLD QIGATAQTMV ALAAGSTIAG
NLSVLGAASN VIIIQNAEKD GATITFLEFV KAGIPLTAAN LAVYWLFLEI WPAL
|
|---|
| |