Gene Mthe_1301 details

Gene Information

• Locus tag: Mthe_1301
• ID: 4462942
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: +
• Start bp: 1406969
• End bp: 1407586
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 639700319
• Product: rhomboid family protein
• Protein accession: YP_843719
• Protein GI: 116754601
• COG category: [R] General function prediction only
• COG ID: [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATCTCAG TCGGTATGGT CTCTGACTGG GATGATATCA GGCCCAGAGG CTCCAGCATC 
TCCGCATCTC TTGCGATAAT CGCTCTGTGC ATCCTCGTAT CGATCGCAAT GGCCATTGAC 
CCCTGGGCTG TGAGGGGATA CCTCTCCCTG AATCCAGCGC TTGTCGAGTC CAGGCCGTGG 
ACGCTGGTGA CGCACATATT CGTTCATGCT GACATAGGCC ATCTCTTCTG GAATATGCTG 
GCCCTCTTAT TCTTCGGAAC AGAGCTCGAA AGAAGGGTTG GCGAGAGAAA TTTCCTCTTG 
GTCTTCTTCG CATCCGGAAT ATTCGGCGGC ATTATAGAGA TGCTTGTGGC AACAGGATAT 
ATGATGGGAG CCAGCGGGGC TATCATGGGG GTCATGGGAG CTCTGGCGAT AATCGCGCCC 
GAGATCAGGG TTATAATCTT CCCCATACCA ATACCTCTGG GGATACCACT GGCGATAGCC 
CTGATCGCGT TCCTGGATCT GTACTACCAG ATAAGCCTGC GGGGAGCGGA TGGCATAGGG 
CACATGGCGC ACCTCGCAGG ACTTCTCGCC GGCCTATTCT TTGGTCAGAG CTTCGGAAGG 
AGAAGAAGGT ATTACTGA 

 

Protein sequence

MISVGMVSDW DDIRPRGSSI SASLAIIALC ILVSIAMAID PWAVRGYLSL NPALVESRPW 
TLVTHIFVHA DIGHLFWNML ALLFFGTELE RRVGERNFLL VFFASGIFGG IIEMLVATGY 
MMGASGAIMG VMGALAIIAP EIRVIIFPIP IPLGIPLAIA LIAFLDLYYQ ISLRGADGIG 
HMAHLAGLLA GLFFGQSFGR RRRYY