Gene Mthe_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1293 
Symbol 
ID4462934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1399750 
End bp1400133 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content56% 
IMG OID639700311 
Product30S ribosomal protein S8e 
Protein accessionYP_843711 
Protein GI116754593 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2007] Ribosomal protein S8E 
TIGRFAM ID[TIGR00307] ribosomal protein S8.e 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.73371e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTGGC AGGGAAAGTC GGCTAGAAAG CCCACTGGTG GAAGGTTGGT TCCGGCCAGA 
GGGAAGAGAA AGTATGAGCT GGGCAGAGAG CCAGCAGAGA CGCTTGTCGG TCCAATCAGG
GTCAAGAAGA TCCGCACACG TGGAGGCAAC CAGAAGCTCC GCCTTCTTAA AGCAGACGTT
GCCAGCGTCT CGGATCCGGT CACAGGTGCC ACAAAGCTTG TGAAGATCGA GACAGTGGTG
GACAATCCTG CAAACAGGCA TTATGTGAGA AGGAACATAA TCACGAGAGG TGCTGTGATC
AGGACCGAGA TCGGCGAGGC CAGGGTTTTG AGCAGACCCG GGCAGGATGG CGTGGTGAAT
GCTGTTCTCC TGCCGAAGCA CTGA
 
Protein sequence
MKWQGKSARK PTGGRLVPAR GKRKYELGRE PAETLVGPIR VKKIRTRGGN QKLRLLKADV 
ASVSDPVTGA TKLVKIETVV DNPANRHYVR RNIITRGAVI RTEIGEARVL SRPGQDGVVN
AVLLPKH