Gene Mthe_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1279 
Symbol 
ID4461947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand- 
Start bp1387781 
End bp1388452 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content57% 
IMG OID639700296 
Productdeoxyribonuclease V 
Protein accessionYP_843697 
Protein GI116754579 
COG category[L] Replication, recombination and repair 
COG ID[COG1515] Deoxyinosine 3'endonuclease (endonuclease V) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0152491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAATGA GATACAGGGC ATTGCATTCG TGGGATGTAA GACCGGACGA AGCAGTTGAG 
ATACAGAAGA TGCTGGCCGG AAGTGTGAGG TTTCAGAGGG TGGATCGCGT GGAAACTGTG 
GCAGGAGCAG ATGTCTCTTT CTCGGGATCG AGGGCACATG CTGCTGCTGT TCTGCTCGAT 
TACCATGATA TGCGCCTCCT CGACGTATCC TTCGCGGAGA TGGATGTGGT TTATCCCTAC 
ATTCCGGGGC TGCTCACGTT TCGCGAGGGT CCTGTCATCC TCAGGGCTCT TGAGGGGATC 
GATGAGGCGG ATGTCCTGCT CTTCGATGGT CAGGGTATCG CGCATCCGCG CAGATTTGGG 
GAGGCGAGCC ATCTCGGGTT GCTCCTCGAC CGCCCCTCCA TAGGCTGTGC GAAGTCCAGG 
CTTTGGGGGG AGTTCCGCGA ACCTGATGGG GAAAGAGGAT CTTTCTCCCT GCTGGTTGAT 
CGCGGGGAGG TTGTGGGCGC CGCTCTCCGC ACCAGGACGA ACGTCAGGCC GGTGTTCGTA 
TCACCAGGCC ACATGTCAGA TCTGAGTTCC GCGATCGAGA TAGCGCTGAA CTGCGCGAGA 
GGATATCGAG TGCCGGAACC CTTGAGATTG GCGCATATCC TGTCACTGAA AAGGGCAAGA 
ATGACGCGGT AA
 
Protein sequence
MGMRYRALHS WDVRPDEAVE IQKMLAGSVR FQRVDRVETV AGADVSFSGS RAHAAAVLLD 
YHDMRLLDVS FAEMDVVYPY IPGLLTFREG PVILRALEGI DEADVLLFDG QGIAHPRRFG 
EASHLGLLLD RPSIGCAKSR LWGEFREPDG ERGSFSLLVD RGEVVGAALR TRTNVRPVFV 
SPGHMSDLSS AIEIALNCAR GYRVPEPLRL AHILSLKRAR MTR