Gene Mthe_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1277 
Symbol 
ID4461945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1384212 
End bp1385564 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content59% 
IMG OID639700294 
Producttryptophan synthase subunit beta 
Protein accessionYP_843695 
Protein GI116754577 
COG category[R] General function prediction only 
COG ID[COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) 
TIGRFAM ID[TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.82618e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGATCCA AGATACTGCT CGATGAGGAG GAGATCCCGA AGAGATGGTA TAATGTGGCG 
GCAGATATGC CCAGACCTCT TGACCCGCCG CTGAACCCTG CGACTCATGA GCCGCTGAAG
CCCGAGGACC TCGAGCCGAT ATTTCCGAGA TCCCTTATAA AGCAGGAGAT GAGCACAGAG
AGATGGATAG ACATTCCCGA GGAGGTGAGG GACGTCTACA GACTCTGGCG CCCGACACCT
CTGTACAGGG CTGTCAGGCT TGAGAAGGCC CTCAAAACAC CTGCCAGGAT CTACTACAAG
TACGAGGGAG TGAGCCCTGC GGGAAGCCAC AAACCGAACA CTGCTGTGCC CCAGGCTTAC
TACAACATGA AGGAGGGCAT AGAGAGGATA GCCACAGAGA CAGGGGCAGG ACAGTGGGGC
TCGGCGCTCG CGCTTGCCAC ATGCATCTTC GGCCTGAAAT GCACGATCTA CATGGTCCGC
TCTAGCTACG ACCAGAAGCC ATACCGCAGG AGCATGATGC GGGTCTGGGG TGCGGAGTGC
TTCCCGAGCC CGAGCAACAG GACGAACGCT GGCAGGCGAA TCCTGGAACA GTTCCCGGAC
ACGCCTGGCA GCCTTGGAAT AGCGATATCA GAGGCTGTTG AGGATGCGGC CACGCATGAT
GATACGAACT ACGCCCTCGG ATCCGTTCTG AACCACGTGC TCCTTCACCA GACCGTCGAG
GGTCTTGAGG TCAAGAAGCA GTTCGAGCTC GTGGACGATT ACCCGGATGT GATATACGGC
TGCTGTGGCG GGGGGAGCAA CTTCCCGGGA GTGTGCTTCC CGTTCATCCC TGACAAGCTC
AATGACAAGA AGGAGCTCAG GCTTGTGGCG TGTGAGCCGA CGGCGTGCCC CAGCCTCACC
AAGGGTCTGT ACACGTACGA CTTCGGAGAT ACTGCGCGCC TGACGCCGCT GCTCAAGATG
TACACGCTCG GCCATGACTT CGTGCCGCCC GGGATACATG CAGGCGGGCT GAGGTACCAC
GGGGATGCGC CCCTGCTCTG CAGCCTGGTG AACGCTGGAA TCATCGAGGC CCAGGCTTTC
CACCAGCGAG AGGTCTTCGA TGCCGCGACG ACCTTCGCGC GCGCAGAGGG CATCGTCCCG
GCGCCGGAGT CAGCGCATGC AATCAAGCCC GCGATCGACG AGGCGATCCA ATGCAGGAAG
ACGGGAGAGA CGAAGACGCT GCTCATAAAC CTGAGCGGCC ATGGGCACTT CGATCTATCT
GCGTACGATG CGTACAACGA TGGGATCCTC GAGGATTATG AGTATCCAGA GGAGCTGGTG
AGGCAATCGC TTGCCAGGCT GCCGAAGGTG TAA
 
Protein sequence
MRSKILLDEE EIPKRWYNVA ADMPRPLDPP LNPATHEPLK PEDLEPIFPR SLIKQEMSTE 
RWIDIPEEVR DVYRLWRPTP LYRAVRLEKA LKTPARIYYK YEGVSPAGSH KPNTAVPQAY
YNMKEGIERI ATETGAGQWG SALALATCIF GLKCTIYMVR SSYDQKPYRR SMMRVWGAEC
FPSPSNRTNA GRRILEQFPD TPGSLGIAIS EAVEDAATHD DTNYALGSVL NHVLLHQTVE
GLEVKKQFEL VDDYPDVIYG CCGGGSNFPG VCFPFIPDKL NDKKELRLVA CEPTACPSLT
KGLYTYDFGD TARLTPLLKM YTLGHDFVPP GIHAGGLRYH GDAPLLCSLV NAGIIEAQAF
HQREVFDAAT TFARAEGIVP APESAHAIKP AIDEAIQCRK TGETKTLLIN LSGHGHFDLS
AYDAYNDGIL EDYEYPEELV RQSLARLPKV