| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1275 |
|---|
| Symbol | |
|---|
| ID | 4461943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 1381454 |
|---|
| End bp | 1382983 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639700292 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_843693 |
|---|
| Protein GI | 116754575 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0258128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACAGGG CGGGCAACGC AGCCGTAACC CCATGCAGAT CGCTTAGGGT TCTCGATCCG
CAGGACCTCA ACGCGAACAG GATCGAGGAT TCACTGGAAT CACTCGGCCC TGAGGAGACA
AGAGTGATAG TGCTTCATGA TGACAACGTG ACAGATACTG CGGGCGAAAA GCTGCACACC
TTGGATATCC TCAAGGGAAG CGCCATGCTC GTCCCGGGGA ACAAGATCCC AGAGCTGGCC
AGGCTGAAGG GCGTAAGGGG GATCTACAGG GATCAGAAGC TCAGGGTCCT GGGCGGATCA
TGTGGCACGG AGCAGGCAGG ATCAGGCTTG CCCGGATCTC CTGAGAACCC GAGGAGAGCA
ACGACAGGAC TTACAGGCAA TGGCGTGACG GTCGCGCTCA TAGATACAGG CGTGGATGCG
GAGCACGACT CTCTAGATGA TCTTGATGAT GATCCAGCCA CATATGACCC CAAGATCGTC
GCATTCGTTG ATATGGTGAA CGGCCTGGAG AAACCGTATG ATGACAACGG CCATGGAACG
CACTGCGCAA GCCTCATATC AGGCACAAAG GGCATGGGTG TGGCGCCCGG ATCGAGGCTT
GCTGTGCTTA AGGTCATGGA CAGGGATGGA TCATGCTATC TATCAGATGC TCTATCCGCG
CTCGACTGGT GCGCCAAGAA CAAGGATACA TACGGTATCA GGGTGATATC CTTCAGCGTT
GGGGGGGAGA GGAGCTCCGA GAGGCCAACG CTCCTCGATG AAGCCTGCAA CAAGATGGTC
GAGGATGGTA TCGTTGTTGT TGTGGCGGCA GGCAACTCAG GACCATCGCC ATCCTCCATT
GTCATTCCTG GAGAGGCAGA GGAGGTGATA ACCGTCGGCG CGATAGATTC AAGAGGGAAA
ATCTTCGAGA GATCCTCGCG TGGGCCCACC TCCGATGGGA GGATCAAGCC GGACATAGTG
ACCATTGGAG TCGATGTTCC ATCAGCGCTT GCAGGGACGA AGGATGATGA GAGCTGCATG
AGCGGGACAT CCATGGCCGT TCCACAGGTT GCCGGAGCAG TCGCTCTGCT CCTGGAGGGC
TTCGGGAACC TGAGCCCGGC TGATGTCAAG AGGGTGCTTC TCAGATCTGC AGATGATTTA
GGTGATACAG GCGCTGACAA CACGTTCGGC TGGGGGGCGA TGAACATCAG TAGAGCTCTG
ACATACCTGA GAGAAGATCC TGAGATGGTG GCCGGGCCCG AGCTGAAGAG CGTCGACCTG
AGCTCGAATG AGGCAAATGT GGGGGATCTC GTCGTCATCG AGGCGCTTGT CGCAGGCGAG
GTAGAGGAGG TGACATCCAC GATAAGTGGA GCTGAGAAGG TGGCGGAGAT ACCCATGGTC
GACTTCGATC TCAACAGCAT ATACACCACG TTCTGGGAGA CAGGTCTCTG GAAGCCCGGG
GATTACACCA TAAATGTCGA GCTTCGCGGG AGGTATGGCG AGAGGATCAG CAGATCCATA
CCCTTTCGCC TGAACCCCAG GAGGGGATAG
|
|---|
| Protein sequence | MDRAGNAAVT PCRSLRVLDP QDLNANRIED SLESLGPEET RVIVLHDDNV TDTAGEKLHT
LDILKGSAML VPGNKIPELA RLKGVRGIYR DQKLRVLGGS CGTEQAGSGL PGSPENPRRA
TTGLTGNGVT VALIDTGVDA EHDSLDDLDD DPATYDPKIV AFVDMVNGLE KPYDDNGHGT
HCASLISGTK GMGVAPGSRL AVLKVMDRDG SCYLSDALSA LDWCAKNKDT YGIRVISFSV
GGERSSERPT LLDEACNKMV EDGIVVVVAA GNSGPSPSSI VIPGEAEEVI TVGAIDSRGK
IFERSSRGPT SDGRIKPDIV TIGVDVPSAL AGTKDDESCM SGTSMAVPQV AGAVALLLEG
FGNLSPADVK RVLLRSADDL GDTGADNTFG WGAMNISRAL TYLREDPEMV AGPELKSVDL
SSNEANVGDL VVIEALVAGE VEEVTSTISG AEKVAEIPMV DFDLNSIYTT FWETGLWKPG
DYTINVELRG RYGERISRSI PFRLNPRRG
|
|---|
| |