| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1215 |
|---|
| Symbol | |
|---|
| ID | 4462355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 1310156 |
|---|
| End bp | 1311262 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639700231 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_843634 |
|---|
| Protein GI | 116754516 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2768] Uncharacterized Fe-S center protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCG ATGTTTACTT TAAGGACATG AGATCCAGGA GCGACGGCGA GAACAAGCTC
GAGAAGATCA GAAGGCTCTT CAACGCTGCA GGCTTCGATA AAATTATCGA TAAAGGCGAT
CTCACCGCCA TAAAGCTCCA CTTCGGCGAG GTGGGGAATG ACACGTACAT CAGCCCTGTA
TTCGTGCGTG AGGTCGTGAA GCTTGTGAAG GAGAAGGGCG CGCGGCCGTT TCTGACGGAC
ACTAACACGC TGTACAGCGG CGGCCGTGGG AACTCTGTGG ACCACATCCG GACAGCGATA
GGGCATGGCT TCGCATATGC GGTCGTCGAC GCGCCCGTCA TAATCGCAGA CGGACTGCGT
GGCGAGAACC ACGTCAGTGT TGATGTGAAC CTCAATCACT TCAGATCTGT GAGGATCGCC
GGGGATATCG TCAGCGCCGA GAGCATGATC GTGATATCTC ACTTCAAGGC GCACATGGTG
GCGGGCTTCG GCGGGGCGAT AAAGAACCTC GGCATGGGGT GCGCGCCGCC GATCGGAAAG
GCTGAGCAGC ACACTGCAAA GCCCATGGTG TATAAAGAGA AATGCAGGGG ATGCGGCAGA
TGCATGAAGG CGTGCCCCAG GTCTGCAATC TCTGTGGTTG ACGGGAAAGC ATACATAGAT
CTCGGTGTCT GTGTCGGATG CGGCGAGTGC GTCAGGGCAT GCCTGGAGAG GGCAATGGAC
TTCGACTGGG CTGTTGCGAT ACCCCCATTC GTGGAGAGAA TGGTTGAGTA TGCATATGGA
GCTGTTCTCG GCAAATCCGG ACGCGTCGGT TTCTTCAACT TTCTGATCGA TATAACGCCG
GACTGCGACT GCGTCCCCTG GTCCGATGCT CCGGTGGTCC CGGACATAGG AATTCTCGCA
TCCAGGGACC CGGTCGCCAT CGACATGGCC AGCTACGATC TAGTCAACGC GCAGATGGGG
CTCGAGAACA GCTACCTGAA GAGCAACAGG ATGCCCGGAG AGGACAAGTT CAGGGGGTGC
TGGGAGTCGA CGAACGCTCT GCATCAGATT GTGTATGGGG AGAAGATCGG CCTTGGCACC
GGCAAATACA ATCTCATCAG GATCTGA
|
|---|
| Protein sequence | MTSDVYFKDM RSRSDGENKL EKIRRLFNAA GFDKIIDKGD LTAIKLHFGE VGNDTYISPV
FVREVVKLVK EKGARPFLTD TNTLYSGGRG NSVDHIRTAI GHGFAYAVVD APVIIADGLR
GENHVSVDVN LNHFRSVRIA GDIVSAESMI VISHFKAHMV AGFGGAIKNL GMGCAPPIGK
AEQHTAKPMV YKEKCRGCGR CMKACPRSAI SVVDGKAYID LGVCVGCGEC VRACLERAMD
FDWAVAIPPF VERMVEYAYG AVLGKSGRVG FFNFLIDITP DCDCVPWSDA PVVPDIGILA
SRDPVAIDMA SYDLVNAQMG LENSYLKSNR MPGEDKFRGC WESTNALHQI VYGEKIGLGT
GKYNLIRI
|
|---|
| |