| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1187 |
|---|
| Symbol | |
|---|
| ID | 4462233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 1275896 |
|---|
| End bp | 1276897 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639700204 |
|---|
| Product | dienelactone hydrolase |
|---|
| Protein accession | YP_843609 |
|---|
| Protein GI | 116754491 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGAG AAAAAGTGAT GGCTGAAAAG CCTGTTACCT TTCACAGCAG CTGTCTTAGG
CTTGCTGGAG TTCTAAGATA CCCAGCTGGG ATTAAAGATC CTGCACCTGC GGTCCTCATG
ATCCATGGAT CACTTGAGCA GGACAGGGAC GGGAATCTCC TAAACAGACC TGACGGAAGG
CCAGTATTTA AGAAGAATTT CTTTCTGGAA ATATCAAAGA GGCTAGCACG TGAGGGATTT
GCAACCTTCT CATGGGACAG AAGGGGTATT GGAGAGAGCG AGCCTCCTGT CTTTGATGGG
GGATATCTTC AGGATGCTGA AGATGCGATG GCTGCCTATC GGGCACTTTC CTCCCTCGAT
CTTGTGGACC CTGAAAGAAT CGCGGTTATG GGTCAGAGCG CAGGGGTCTA CACAGCAGGT
CTACTGGCTA AAAAGGAGAA CAGGCCGAAA GCATACATTC TCCAGGGAGG TCTTTACAGA
GATTATGCAA AGATGATGAT CTTCAACTAC CAAAGAGTGG TAGAATACGC TACAAAGAGC
CCGGAAAACC TCCGATGGGT TGAGGAGAAC GACATACTGG GTCTGGTGAT TGGACTGAAC
CTTCAGTCGC TTATGGAGAG GGCGATGATG GGTGAAGTCG AACACCTCTT CAACTACAAG
GGGAAAACGT GGAGGATCCG GCACGACCCG ATCTGCTATT TACCTGAATA TTCGCCAAAA
AACCAGTTTA AATACATACA GAAGCCGGTG CTTGTAATTC ATGGAGCTTG CGATCTGAAC
GTTCCAGTTG AGGATGCCTT CATGATAGAG CAGGATTTAA AGGAGCATGG CAACAAGAAC
GTGGAACTGG TAATAATCCC TGATGCAGAT CACAGCTTCC AGCAGATCGC AGAACCAGCT
GAGTTGAGAC TCAAAGAGCG AATCTCTCTT GAAAGTTTTC GACGTCCCTA TCGTGAGGAG
TACTTTCTCG CAGTTGTATC CTTTCTCAAG AGATGGCTTT AA
|
|---|
| Protein sequence | MSGEKVMAEK PVTFHSSCLR LAGVLRYPAG IKDPAPAVLM IHGSLEQDRD GNLLNRPDGR
PVFKKNFFLE ISKRLAREGF ATFSWDRRGI GESEPPVFDG GYLQDAEDAM AAYRALSSLD
LVDPERIAVM GQSAGVYTAG LLAKKENRPK AYILQGGLYR DYAKMMIFNY QRVVEYATKS
PENLRWVEEN DILGLVIGLN LQSLMERAMM GEVEHLFNYK GKTWRIRHDP ICYLPEYSPK
NQFKYIQKPV LVIHGACDLN VPVEDAFMIE QDLKEHGNKN VELVIIPDAD HSFQQIAEPA
ELRLKERISL ESFRRPYREE YFLAVVSFLK RWL
|
|---|
| |