| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1163 |
|---|
| Symbol | |
|---|
| ID | 4462628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 1246845 |
|---|
| End bp | 1248218 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639700180 |
|---|
| Product | glutamate synthase (NADPH), homotetrameric |
|---|
| Protein accession | YP_843585 |
|---|
| Protein GI | 116754467 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCCCA GAGTGAAGAT GCCAAAGCAG ACCCCTGAGT TGAGGCGCAG GAACTTCTCA
GAGGTGGCTC TAGGGTACAG TAAAGAGGAT GCTCTTCGGG AGGCTGATAG ATGCCTCGGG
TGCAAGAAGC CCGGATGTGT AGAGGGCTGC CCTGTCGGCG TTGAGATCCC GCAGTTCATA
GATGCGCTGA GGAGGGGCGA TGCTGATGAG GCGCTCAGAA TAATCAAGCG CAGGAACAGC
CTTCCCGGGA TATGCGGCAG GGTCTGCCCT CAGGAGGAGC AGTGCGAGAG CAGATGTGTT
CTCGCCAGGA AGGACGAGCC TATCGCGATA GGGAGGCTTG AGAGGTACGC AGCCGACTTC
GGTCGTGATT GCAGGAGAGC CAGGGAAAGC ACAAAAGGGA AACGCATCGC GATCGTCGGC
TCCGGGCCTG CAGGGCTCAC ATGCGCAGCG GATCTCGCAC TGATGGGTCA TGATGTAACA
ATATTCGAGG CGCTCCACGA GGCTGGTGGC GTTCTCACCT ATGGGATACC GGAGTTCAGG
CTGCCCAAGA GCATCGTGAA GAGAGAGGTC GATTACGTTA GATCTCTCGG TGTCAAGATC
GAGCTCGACG CTGTCGTGGG CAGGACTGTG GGGGTCCAGG ATCTTCTTAG AGAATACGAT
GCCATCTTCC TGGGCATAGG CGCTGGAGCC CCACGATTTC TGAACATACC TGGCGAGAAT
CTCGGCGGGA TATACTCTGC AAATGAGTAT CTCACAAGAA TCAATCTGAT GAAGGCATAC
ATGTTCCCCG ACTTCGACAC CCCGATAAAT AAAGGCAGGA AGGTCGCTGT CATTGGGGGA
GGCAACGTCG CCATGGATGC GGCCAGATCC GCTCTGCGGC TCGGGGCAGT TGAGGTGCAT
ATAGTCTATC GGAGATCGGA GGCCGAGATG CCCGCGAGGC TCGAGGAGAT CGAGAACGCG
AAGGAAGAGG GCGTGATATT CGATCTCCTC ACGAACCCGG TCGCGTTCGA GGGCGATGGG
ATGGTCCGGG CGATGGAGTG TGTCAGGATG GAGCTTGGGG AGCCTGATGC CAGCGGCAGG
AGAAGGCCTG TTGAGAAAAA GGGCTCCGAG TTCACCATGG AGATCGACAC AGCGATCATA
GCGATCGGCA CAACCCCAAA TCCTCTCGTG CTAAGAAGTG TTCCAGGTCT GAGGACAACA
AGATGGGGGA CTGTGGATGT GGATGAGAGG GGAAGGACGT CGATCGAGCG GATATGGGCT
GGGGGGGATA TCGCAACAGG AAGCGCGACC GTTATAAGCG CAATGGGCGC GGGGAAGAGG
GCAGCATTCG ACATCGACTC ATGGCTCAGG GACGGCGGAG AGTGGCGCCC CTAG
|
|---|
| Protein sequence | MSPRVKMPKQ TPELRRRNFS EVALGYSKED ALREADRCLG CKKPGCVEGC PVGVEIPQFI
DALRRGDADE ALRIIKRRNS LPGICGRVCP QEEQCESRCV LARKDEPIAI GRLERYAADF
GRDCRRARES TKGKRIAIVG SGPAGLTCAA DLALMGHDVT IFEALHEAGG VLTYGIPEFR
LPKSIVKREV DYVRSLGVKI ELDAVVGRTV GVQDLLREYD AIFLGIGAGA PRFLNIPGEN
LGGIYSANEY LTRINLMKAY MFPDFDTPIN KGRKVAVIGG GNVAMDAARS ALRLGAVEVH
IVYRRSEAEM PARLEEIENA KEEGVIFDLL TNPVAFEGDG MVRAMECVRM ELGEPDASGR
RRPVEKKGSE FTMEIDTAII AIGTTPNPLV LRSVPGLRTT RWGTVDVDER GRTSIERIWA
GGDIATGSAT VISAMGAGKR AAFDIDSWLR DGGEWRP
|
|---|
| |