Gene Mthe_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1028 
Symbol 
ID4462777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1111268 
End bp1112260 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content55% 
IMG OID639700047 
ProductDNA primase large subunit 
Protein accessionYP_843453 
Protein GI116754335 
COG category[L] Replication, recombination and repair 
COG ID[COG2219] Eukaryotic-type DNA primase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.163924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGCAT TCTGGTATCC GTTCACACAC GCAGCAGCAA AGGAGATCCG GCTTATCGAT 
GCTCCGCTGG AGGACGTGCT CAGCAGCAGG GCGTTTCAGC CTGTCAGGCG CAGGGCAGTT
GAGCGCGTCC GCGGAGCGCT GCATGGAGAG ATACCTGATG CGGATGCATC AGACGGCGTG
AAGCAGAACG TAGAGCTTTT ATCGTATCCT CTCGCCAGGC TGATCGTCTC GTGCATTGAT
GATGACTACC TTCTGAGGCG CTATGTCCTG GCGGAGGCGA AGCTCGCCCA CAGGAGGTTG
AGAAGCTCAG ACACAGAAGA GGTGCTTGAG ATAGCCAGGG ATCTGGGGAT GAGTCCGATT
TATGAGGGGG ATAACTTCAG AATACATTTT ACGGATTTTG TGATCTCCGC GGCGAGGTTC
AGGAGCCAGA AGTGGAAGCT CATCAACAGA ACCATCGACC ACGGCTATCT CAAAGTTACC
CGGGAAGAGC TGCTCCGCCT GATGCAGGAG AGAATCAGGG ACAGGATACA GGAGGGGCTC
CCGCTCGATG CTGGAAGCAT ATGTGAGGGG CTGTCGGATC ACCTGAGATC CATAAGAGAC
GAGCTCGCAT CATCGAAGCG GAGCTCGATG GTGGATCTCG GTGAGTTCAG CCGGGACGCT
CTGCCGCCAT GCATGAGATC GCTGCTGGAG CAGCTCGCTG CCGGCAGAAA CCTTGCTCAC
ACAGCGAGGT TTGCGCTCAC AAGCTTTCTG CTCAACATAA ATCTGGGTGT CGAGGATATA
ATCGGCATCT TCAACAACAC CCCCGATTTC GATGAGGAGA TGACAAGATA TCAGATAGAG
CACATCGCCG GCTCTACAGG AACGAGATAC ACCCCACCTT CATGCTCCAC GATGCTCACA
TACGGTAACT GTCCTGGAGG CGATGAGCTC TGCAGGCGCA TAAAGCACCC AATAAGCTAC
TACAGGCGTC GCCTGCGTGA ATCGCGATCC TGA
 
Protein sequence
MRAFWYPFTH AAAKEIRLID APLEDVLSSR AFQPVRRRAV ERVRGALHGE IPDADASDGV 
KQNVELLSYP LARLIVSCID DDYLLRRYVL AEAKLAHRRL RSSDTEEVLE IARDLGMSPI
YEGDNFRIHF TDFVISAARF RSQKWKLINR TIDHGYLKVT REELLRLMQE RIRDRIQEGL
PLDAGSICEG LSDHLRSIRD ELASSKRSSM VDLGEFSRDA LPPCMRSLLE QLAAGRNLAH
TARFALTSFL LNINLGVEDI IGIFNNTPDF DEEMTRYQIE HIAGSTGTRY TPPSCSTMLT
YGNCPGGDEL CRRIKHPISY YRRRLRESRS