Gene Mthe_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0935 
Symbol 
ID4463328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1019339 
End bp1020868 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content58% 
IMG OID639699954 
Productbeta-ribofuranosylaminobenzene 5'-phosphate synthase 
Protein accessionYP_843363 
Protein GI116754245 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1907] Predicted archaeal sugar kinases
[COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) 
TIGRFAM ID[TIGR00144] beta-RFAP synthase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTTG CCTTTCCTGT GGCCCAGGAG ATAGCGAAGC TCGAGAGGAT CGTGGGCAGG 
CTCAGTCCCG TACAGAAGAT GCTTCTGGGG ACCGATGGCT CTGTGACTAG CCTGCTGGAG
GTTATCACAG GCTCGCCTGT GGGAATAGAG ACGTTGGAGC AGAGGGTGGT GCCTGCGACT
GATGACGTCG CGAGGGAGCT TGATATAGAT GTTGGGGAGG ACGTCAACTA CCGAGTCGTC
CGGCTGAAAA ATGCCCGCAC CGGCGAGACG CTGATACACG CGGTCTCCTA CACTCCACTC
AAGAGACTGG AGCCCGGGTT CAAGAACGAC CTGATGCGCG CGGACATCCC GATAGGCCAG
ATACTCCACA AGCACCGCAT AGAGTCGCGG AGGGATATAA CACAGACGGA GTGCGAGCAG
GCGGACGATA GGATGAGCCA GCTCTTCAAC ATCTTCCCGA AGGAGCTGAT GCTCTCAAGG
AGATACAAGA TCATAAGAAA GGGGGAGCCG CTGATCGCAA TAAGGGAGAC GTTCCCCTAC
AACATGTTTC AGGATACAAG AAGGGTGATC ATCGAGACGC CTGCGAGGAT CCACATGACG
CTCACAGACC TCTGCGGCGA GGCCGGGCGG GTCGATGGCG GGGTGGGGAT AGCGCTCGAT
AAGCCGAACA TAGTCGTGGA GGGAGAGATC GACAGGGATC TATCAGTCGA GGGAGAGCAG
TCTGAGAGAG CGCTGGAGGC GGCGAAGAGG GTCGCCGAGA GGTTCGGGCT TGGAGGAGCG
CGCATATCTG TTAGAAGCTG CTACAGGACG CATGTGGGTC TTGGCAGCGG AACACAGCTC
GCTGTGGCGG TTGGAAAGGC GCTCTGCGAG CTTTACGGCG AGAAGGCGAG CATCAGAGAG
ATTGCCTCTG CGGTTAGCCG CGGCGGGACC AGCGGCATAG GTGTCGCGGC ATTTGAGATG
GGCGGCTTCA TAGTCGACGG GGGTCACACA TTCGGCCCGG GAAGGGAGAA GTCTGACTTC
AGACCATCAT CTGCTAGCTC TGGGGTGAGA CCACCGCCCG TGATAGCGCG CCATGACTTT
CCTGAGAGCT GGAGGATAGT GCTTGCCGTT CCAAACATAG AGAAGGGCGC ATACGGCCAG
CGCGAGATCG ACATATTCAG GGAGTACTGC CCTGTCCCGC TCTCAGAGGT CCAGGAGCTG
TGCTACCAGA TAATGGTCAG GATGATGCCG TCCGTTGTTG AGGAGGACCT AGATGCATTC
GGGATGGCGG TGAACAGGAT ACAGCAGCTG GGCTTCAAGC GCGTGGAGGT CGAGCTGCAG
CATCCTATGA TCAAAATGCT GATGCAGGAG ATGGTCTCAG CTGGAGCAGC ATGCGCCGGC
CTGAGCTCCT TCGGGCCCAC GGTGTATGCG GTAACAGACA CTAACACCAG GGACATAGAG
TCAGCAGCCC GCGATGTGAT GGGCGATATC GGCGGAGAGA TTATTATAAC AAGATCGAGG
AACGAGGGGG CCAGGATAAG GACCGCGTAG
 
Protein sequence
MTFAFPVAQE IAKLERIVGR LSPVQKMLLG TDGSVTSLLE VITGSPVGIE TLEQRVVPAT 
DDVARELDID VGEDVNYRVV RLKNARTGET LIHAVSYTPL KRLEPGFKND LMRADIPIGQ
ILHKHRIESR RDITQTECEQ ADDRMSQLFN IFPKELMLSR RYKIIRKGEP LIAIRETFPY
NMFQDTRRVI IETPARIHMT LTDLCGEAGR VDGGVGIALD KPNIVVEGEI DRDLSVEGEQ
SERALEAAKR VAERFGLGGA RISVRSCYRT HVGLGSGTQL AVAVGKALCE LYGEKASIRE
IASAVSRGGT SGIGVAAFEM GGFIVDGGHT FGPGREKSDF RPSSASSGVR PPPVIARHDF
PESWRIVLAV PNIEKGAYGQ REIDIFREYC PVPLSEVQEL CYQIMVRMMP SVVEEDLDAF
GMAVNRIQQL GFKRVEVELQ HPMIKMLMQE MVSAGAACAG LSSFGPTVYA VTDTNTRDIE
SAARDVMGDI GGEIIITRSR NEGARIRTA