| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0922 |
|---|
| Symbol | |
|---|
| ID | 4462386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 1004430 |
|---|
| End bp | 1005431 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639699941 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_843350 |
|---|
| Protein GI | 116754232 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAG CCATGTTTTA CGAGAGGCTT GAGGGCAGCG ATGTCAGATG CAACCTCTGC
AGTCACAACT GCAGGATTCG TCCCGGTCAC AGGGGCATCT GCGGTGTCAG GGAGAACATC
AATGGAACCC TCTACTCGCT CGTTTATGGC AAAATTGTGG CTGAGCATGT CGATCCTGTG
GAGAAGAAGC CTCTGTTTCA CTTCCAGCCG GGCAGCAGGA GCTACTCGAT CGCCACTGTC
GGATGCAACT TCAGATGCAT ACACTGCCAG AACGCTGACA TCTCCCAGAT GCCCGTGGAC
AAAAACATGA TCATCGGCAG CGAGAGATCA CCAGAAGATA TCGTCGCGGC GGCGCTTGAG
GCCGGCGTTC AATCTATATC GTATACATAC ACAGAGCCAA CGATATTCTT CGAGTTCGCG
CTCGATACCG CTGTTAAGGC TAAGGAGTTC GGGCTCAAGA ACAACTTCGT CAGCAACGGC
TACATGTCGG AGGCTGCGGC AAGGGCGATC GCGCCATACT TGGACGCGAT CAATATCGAC
CTGAAGGGAG ATGATGAGTT CTACAAAAAG ATATGCAGCG CCAGGGTGGA GCCCGTGAAG
AGAAACATCG AGCTCTTTCC GAAGCTTGGA GTGTGGACTG AGGTCACAAC TCTTGTGATC
CCCGGATACA ACGACTCTGT TGAGCAGCTT AGGGAGATAG CCGAGTTTCT CGCAGGAGTG
AGCGTCGACA TCCCATGGCA TGTCTCCGCC TTCTACCCCA CATACAGGCT CAGAGATGCT
CCGCCGACGA GCGCGGCCAC GATCCGGCGG GCCATGGGCA TAGGCAGGGA GGCAGGGATC
CGCTACATAT ACGCAGGGAA CATCCCGGGT GAGGGGGAGA ACACTCACTG CCACAACTGC
AGTGAGCTCC TTGTCGAGCG TTTCGCCTAC CGCGTGACTT TGAACAGAAT AGTCGATGGC
CGGTGCCCCA GGTGCAGGAC ACAGATCCCG GGCGTCTGGT GA
|
|---|
| Protein sequence | MKEAMFYERL EGSDVRCNLC SHNCRIRPGH RGICGVRENI NGTLYSLVYG KIVAEHVDPV
EKKPLFHFQP GSRSYSIATV GCNFRCIHCQ NADISQMPVD KNMIIGSERS PEDIVAAALE
AGVQSISYTY TEPTIFFEFA LDTAVKAKEF GLKNNFVSNG YMSEAAARAI APYLDAINID
LKGDDEFYKK ICSARVEPVK RNIELFPKLG VWTEVTTLVI PGYNDSVEQL REIAEFLAGV
SVDIPWHVSA FYPTYRLRDA PPTSAATIRR AMGIGREAGI RYIYAGNIPG EGENTHCHNC
SELLVERFAY RVTLNRIVDG RCPRCRTQIP GVW
|
|---|
| |