Gene Mthe_0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0884 
Symbol 
ID4461841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp959013 
End bp959681 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content55% 
IMG OID639699903 
ProductSPP-like hydrolase 
Protein accessionYP_843312 
Protein GI116754194 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR01482] Sucrose-phosphate phosphatase subfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR01487] sucrose-phosphate phosphatase-like hydrolase, Archaeal 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTGAGG CTGTGGCCGT CGACATCGAC GGTACGCTCA CAGACGCGAG CAGAGTTCTC 
AGCCCTGTCT CCGTGAGCGT GATCAGGGAG CTCGAGGTGC CTGTGATCCT CGTGACAGGC
AACACCCACT GCTTCACGAG AGCCGCGGCG GTGCTCTTCG GAGTGAGACA CTTCGTCGCA
GAGAACGGCG GGGTCATCTC ATCGGATGAC AGAATAGAGG TCGTCGGCGA CAGAAAATTG
TGCGATGAGG CGTATAAGCA TCTCAAGGAG AAGTTCAACA TCAAAAAGTT CGATTCCAGA
TACCGCCTCA CAGATCTCGT GCTGATCCGT GGGTTTGATG TAGATGCGGC CTCCAGGTAT
CTCGAATCCC TTAACCTCCC TGTGGATCTT GTTGATACTG GTTTTGCCAT TCACATAAAG
AACAGGGGTA TAACAAAGGG CACGGGTCTC CGGAGGATCT CCGAGAGGCT GGGGATTCCA
ACGAAACGCA TTGCGGCCAT CGGCGACAGC CCAAGCGACA TACCGATGAT GGAGATCTCT
GGATTTCCGG CGGCTGTTGG GAATGCACAC CCTTCAGTCA AATCTGCGGC CAGGTATGTT
GCAGATCGAG CATTTGGAGA GGGGTTTGCT GAGATAATCG ACCACATGCG CGCTGCCGGC
ATGATCTGA
 
Protein sequence
MIEAVAVDID GTLTDASRVL SPVSVSVIRE LEVPVILVTG NTHCFTRAAA VLFGVRHFVA 
ENGGVISSDD RIEVVGDRKL CDEAYKHLKE KFNIKKFDSR YRLTDLVLIR GFDVDAASRY
LESLNLPVDL VDTGFAIHIK NRGITKGTGL RRISERLGIP TKRIAAIGDS PSDIPMMEIS
GFPAAVGNAH PSVKSAARYV ADRAFGEGFA EIIDHMRAAG MI