| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0880 |
|---|
| Symbol | |
|---|
| ID | 4461837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 955933 |
|---|
| End bp | 957123 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639699899 |
|---|
| Product | aminotransferase, class I and II |
|---|
| Protein accession | YP_843308 |
|---|
| Protein GI | 116754190 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTTC TCAGAGAGGT TCACGCATGG AATGCTGAGT CCCATCTCTC CCAGACCGTG
AGAGATCTGC CGCCATCCGG GATCCGAAGG TTCTTCGACC TGGTGAACGA GATGGACGAG
GCTATAAGCC TGGGGGTCGG CGAGCCGGAC TTCGTCACGC CATGGCATGT CAGGGAGGCC
TGCATATACT CCCTCGAGTC CGGCTACACC TCATACACAT CAAACAAGGG CATGCCCGAG
CTGCGTGAGG CCATCGCGGA TTTCACTAAG GAGCAGCTTG GGCTCGACTA CGATCCCACC
GATCAGATAC TCGTGACCAC GGGCGTGAGC GAGGCCGTGG ATCTGGCATT CAGGGCGACG
CTCAACCCGG GAGATGAGGT GATAGTGCCC GAGCCCTGCT ACGTCGCATA CGTTCCTGAC
ATAATCCTGG CAGGGGGCGT GCCCAGACAG ATCCCAACAA GAATCGATGA TGAGTTCAGA
GTCACTCCGG AATCGATCGT ACCAGCGATC ACCGAGAAGA CGAAAGCTCT GGTGCTGAGC
TACCCGAACA ATCCAACGGG CGCGATAATG ACACGCAGCG ATCTCGAGAG CATAGCAGAT
CTGGTTGTGG AGCACGACCT TCTCGTCATA TCTGATGAGG TCTATGGCAT GCTCACGTAC
TCCGGCACGC ATGCTAGCTT CGCACAGCTT GATGGCATGT ACGAGAGGAC GATCATACTC
AACGGTCTCT CGAAATCGCA TGCTATGACC GGATGGCGGA TAGGCTATGC GCTTGGCGAT
CCGATGCTCA TAGGCGCCAT GACGAAGATA CATCAGTACA CGATGCTCTG TGCTCCGATA
ATGTCGCAGA TGGCGGCCAT CGAGGCCCTC CTGCATGGAG AGGAGGAGAT GCTCAAGATG
AAGCACGAGT ACAACCTGAG GAGACGGCTC TTTGTCGCCG GACTGAACAG GATAGGTCTG
CGGTGCATAG AGCCACAGGG TGCCTTCTAC GCGTTCCCAT CGATCGCCGA GACCGGTTTG
TCATCAGAAG CCTTTGCAGA GCGCCTGCTC AGGGAGCAGA GGGTGGCTGT TGTCCCGGGG
AACGTCTTTG GGCAGAGCGG CGAGGGATTC CTGAGGTGCT CATACGCCAC GTCCAGGGAG
GAGCTCATCG AGGCGCTGGA CAGGATCGAG ACGTTCCTGG ATGGGCTGTA G
|
|---|
| Protein sequence | MTLLREVHAW NAESHLSQTV RDLPPSGIRR FFDLVNEMDE AISLGVGEPD FVTPWHVREA
CIYSLESGYT SYTSNKGMPE LREAIADFTK EQLGLDYDPT DQILVTTGVS EAVDLAFRAT
LNPGDEVIVP EPCYVAYVPD IILAGGVPRQ IPTRIDDEFR VTPESIVPAI TEKTKALVLS
YPNNPTGAIM TRSDLESIAD LVVEHDLLVI SDEVYGMLTY SGTHASFAQL DGMYERTIIL
NGLSKSHAMT GWRIGYALGD PMLIGAMTKI HQYTMLCAPI MSQMAAIEAL LHGEEEMLKM
KHEYNLRRRL FVAGLNRIGL RCIEPQGAFY AFPSIAETGL SSEAFAERLL REQRVAVVPG
NVFGQSGEGF LRCSYATSRE ELIEALDRIE TFLDGL
|
|---|
| |