| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0843 |
|---|
| Symbol | hisD |
|---|
| ID | 4463056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 909585 |
|---|
| End bp | 910865 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639699862 |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_843272 |
|---|
| Protein GI | 116754154 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.567726 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTGA AGAAGCTGAA TGAGCTGAGT TCAGAGGACC TGAAGGTTCT TCTGTCTAGA
GAGATCGGAA TACAGGACGT CCTGCAGAGG GTCAACGACA TTGTGATGGA TGTCGCAGAG
AACGGCGATG AAGCTCTGAG GAGATACACG GAGCAGTTCG ATGGCGTGCG CCTTGAGAGC
TTCAGGGTAT CAGATGATGA GATCGAGGAG GCGTACGATG CTGTGGATGA GAGTCTTCTC
AGATCTCTGG AGCTTGCGGC TCAGAACATC TACGCATTCC ATGATGAGGA GCGCACGAAG
GATCTCTGGT TGTACCAGGT CGCGCCTGGG GTAGTCGCAG GGCAGAAGGT CGTGCCGCTG
GAGAGCGTCG GTGCTTATGT TCCCGGCGGA AGAGCCGCGT ATCCGAGCTC TGCGCTGATG
TGTGTTATTC CCGCGAAGGT CGCGGGCGTT GAGAGAATGG TCGTGTGCAC GCCGCCGGAC
AGATCTGGCA GGATCTCGCC TCTAACGTTA GCCGCCGCGG ATATTGCCGG TGCGGATGAG
ATCTACAAGC TTGGGGGAGC TCAGGCGATA GCTGCCATGG CCCTCGGAAC CGAGAGCATT
GAGCGTGTCG AGAAGATAGT CGGACCCGGG AATATATACG TCACTGCAGC GAAAATGCTC
GTGAGAGGCA GCGTCGAGAT AGATTTTCCA GCGGGACCCT CAGAGGTTTT AATCATAGCG
GATTCATCTG CGGATCCCGA GTTCGTAGCA GCGGATATGA TCGCCCAGGC CGAGCACGAT
CCATCATCGA TAGCGGTAGT TGTCACGACC AGCGAACCGC TGGCTAAGGC CATCGAGACG
GAGATACCAT CTCAGATTGA GAAAGCGGAG CGGAGGGATA TAGTCCAGGC GAGCCTTGAG
CGATGTGCCA TCCTGTTGGC CGAGAGTCTG GATGACGCTT TGGCATTTTC GAACGCATTC
GCGCCTGAGC ACCTGGAGCT GATGGTCAGG GATCCGATGG ATGCCCTGAA CCTTGTGAGA
AGCGCTGGAT CTGTGTTTCT CGGGCACTAT ACACCCGTAG CTGCTGGCGA TTACGCAACA
GGAACGAACC ATGTGCTTCC CACAGCTGGT TACGCGAGGA TCTTCTCTGG TTTGAACATA
GATGCGTTCA CCAAGAAGAT ATCCATACAG AGCATGACCG CAGATGGGCT TGAGTCGCTC
GCGGATGCTA TAATAAAGAT GGCCGAGTCT GAGGGGCTCA GGGCACACGC TGAATCCGTG
CGGATCCGGA TGAGGAGATG A
|
|---|
| Protein sequence | MIVKKLNELS SEDLKVLLSR EIGIQDVLQR VNDIVMDVAE NGDEALRRYT EQFDGVRLES
FRVSDDEIEE AYDAVDESLL RSLELAAQNI YAFHDEERTK DLWLYQVAPG VVAGQKVVPL
ESVGAYVPGG RAAYPSSALM CVIPAKVAGV ERMVVCTPPD RSGRISPLTL AAADIAGADE
IYKLGGAQAI AAMALGTESI ERVEKIVGPG NIYVTAAKML VRGSVEIDFP AGPSEVLIIA
DSSADPEFVA ADMIAQAEHD PSSIAVVVTT SEPLAKAIET EIPSQIEKAE RRDIVQASLE
RCAILLAESL DDALAFSNAF APEHLELMVR DPMDALNLVR SAGSVFLGHY TPVAAGDYAT
GTNHVLPTAG YARIFSGLNI DAFTKKISIQ SMTADGLESL ADAIIKMAES EGLRAHAESV
RIRMRR
|
|---|
| |