| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0781 |
|---|
| Symbol | |
|---|
| ID | 4462421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 831025 |
|---|
| End bp | 832170 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639699792 |
|---|
| Product | aminotransferase, class V |
|---|
| Protein accession | YP_843211 |
|---|
| Protein GI | 116754093 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.329422 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATATAG AGGATACGCT TCTTATGATT CCAGGCCCGG TCAAGGTCGC TCCAAGGGTG
CTTCGCGCGA TGTCGAAGCC GATGATTAGC CACAGGAGCC CGGAGTTTGG CAGGATATAC
GACGACTGCA GGGAACTCCT CCAAGAGTTC TTCGAGACCA AGAACGAGAT CGTCGTCATG
AGCGGTTCCG GCACATGCGG GATGGATGCT GCTGTTGGCG GGCTGATAGG CAGTGATGAC
AGGATACTCA CGATAACAAA CGGAAAGTTC GGCGAGCGGT TCACGGAGAT AGGCAACAGA
TACGGCAGAG CGATATCAGT CGATTTCGAA TGGGGAATGC CATTCGATCT CGAGCGCGTG
GAGGCAGCGC TTGAGGAGGG TGTGAAGGCT GTGGCCATGG TCCACAACGA GACGTCTGTG
GGCATAATCA ATCCTGCAAG GGAGATAGGC AGACTTGCCA GGAAGCATGA CGCAATATTC
ATCGTTGATG GCATATCCTC AATCGGCGGG AACGAGTTCA AGACCGATGA ATGGGGTATC
GACATAGCGA TAACAGGGTC ACAGAAATGC CTTGCCGTGC CTCCTGGATT GGCAATAGTG
TCTGTGAGCG AGCGGGCAGA GGAGGCGCTC AATGAGAGCT CAGGGGGCTA CTACGCCGAT
CTGAGGGCGC ATCTGAAAAG CGTGAGAAAG AAGCCCACGC AGACGCCCTT CACGCCCGCA
GTTCCTCTCT TCTACGCGCT CCAGGAGGCT CTGCACATGG CGGAGGAGGA GGGCTTCGAG
GCCAGAAGGG CACGCATAGC CAGGCTCGCT GAGGCGGTCA GGGCCGCTGC ATCCGCGCTG
GGCATAGAGC TATTTCCCGT CCTGAACGAG TACTCCAGAT ACTCGAACAC TGTTACAGCG
ATGAAGATCC CACCGGAGAT TGATGATGAG AAGCTCAGGG GCGGAATGAA AAAGCAGGGC
GTCGTAGTTT CAGGCGGCCA GGAGAGGCTC AAGGGGAAGA TCTTCAGGAT AGGCACCATG
GGCGTCTGCT CTGAGGGGGA TGTGCTGAGA ACCATACAGG CTTTAGAGCT TGTGCTCGCA
AAAGAAGGAG TGATCAACGC ACCCGGAGAG GGGGTTGCGG CAGCCGCAAA GGCACTTGAC
AGATGA
|
|---|
| Protein sequence | MDIEDTLLMI PGPVKVAPRV LRAMSKPMIS HRSPEFGRIY DDCRELLQEF FETKNEIVVM
SGSGTCGMDA AVGGLIGSDD RILTITNGKF GERFTEIGNR YGRAISVDFE WGMPFDLERV
EAALEEGVKA VAMVHNETSV GIINPAREIG RLARKHDAIF IVDGISSIGG NEFKTDEWGI
DIAITGSQKC LAVPPGLAIV SVSERAEEAL NESSGGYYAD LRAHLKSVRK KPTQTPFTPA
VPLFYALQEA LHMAEEEGFE ARRARIARLA EAVRAAASAL GIELFPVLNE YSRYSNTVTA
MKIPPEIDDE KLRGGMKKQG VVVSGGQERL KGKIFRIGTM GVCSEGDVLR TIQALELVLA
KEGVINAPGE GVAAAAKALD R
|
|---|
| |