Gene Mthe_0674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0674 
Symbol 
ID4463314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp711839 
End bp712372 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content60% 
IMG OID639699684 
Product2'-5' RNA ligase 
Protein accessionYP_843104 
Protein GI116753986 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATGCT TTGTCGCTGT CGATCTGCCG GAGGAGATTA AGAGAGGGGT GCCGGCGATA 
CAGCAGGCCT TCGCGATGAA CGGGCTCAAG CTTGTAGATC CGAACCTGGT GCACATAACA
CTGAAGTTTC TGGGAGAGGT GGAGGAGAGA AGAGTCGATG ATATCGTAAA TGCGCTCGCG
CGCGTGAGGT TCTCGCCATT CCAGGCGCGC ATCACGGGCG TCGGCGCATT CCCCGGGAGA
TCCATCAGGG TAATCTGGCT GGGCGCCACT GGCCCATTCG AGGAGCTGGC GCGCGCCGTG
GACACCGCGC TCGAGCCCTT CGGGTTTGAG CGCGACAAGA AGTTCAGCGC GCACGCGACC
CTGGCCAGAG TGAAGGACCC GTCACTGAGT CGCATCCTCG CGGAGAGACT GTCAGGCGTA
TCAGAGGTAG ATCTCGGAGC GTTCACGGTC GAGAGGTTTG TTCTCAAGAA GAGCACTCTG
ACACCGAGGG GGCCGGTCTA CGAGGACATC GCAGAGTTCA GAGCTTCTCA GTGA
 
Protein sequence
MRCFVAVDLP EEIKRGVPAI QQAFAMNGLK LVDPNLVHIT LKFLGEVEER RVDDIVNALA 
RVRFSPFQAR ITGVGAFPGR SIRVIWLGAT GPFEELARAV DTALEPFGFE RDKKFSAHAT
LARVKDPSLS RILAERLSGV SEVDLGAFTV ERFVLKKSTL TPRGPVYEDI AEFRASQ