Gene Mthe_0662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0662 
Symbol 
ID4463156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand- 
Start bp698795 
End bp699217 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content53% 
IMG OID639699670 
Productnickel responsive regulator 
Protein accessionYP_843092 
Protein GI116753974 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0229415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGG AGCTCATGAG AATTGGCGTA TCGCTTCCGG AGAAGCTGCT GAGCCGTTTC 
GACGAGATCA TCTCCCAGAG AGGATACTCA TCGAGATCCG AGGGGATAAG GGACGCAATA 
AGGAACTACA TTATTCACTA TGAGTGGATG AGCGATGTCG AGGGCGAGAG GGTGGGCGTG 
ATAACAATAG TATACTCCCA CCATCAGCGT GGCCTGGTGG ACAGCCTGAC GGACATACAG 
CATGAGTTCG GCAGCATAAT AAACTCGAGC CTTCATGTTC ATCTGGACAA GGATAACTGC 
CTCGAGGTTG TGATACTACG TGGCGAGGGA AAGGATGTGA GAAGGGCAGC GGAGAGGATG 
ATGGCACTGA AGGGCGTCAA GCATGTGAAG CTCACCACAA CCTCTGTCGG CGCGGAGCTA 
TGA
 
Protein sequence
MEQELMRIGV SLPEKLLSRF DEIISQRGYS SRSEGIRDAI RNYIIHYEWM SDVEGERVGV 
ITIVYSHHQR GLVDSLTDIQ HEFGSIINSS LHVHLDKDNC LEVVILRGEG KDVRRAAERM 
MALKGVKHVK LTTTSVGAEL