Gene Mthe_0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0639 
Symbol 
ID4462279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp665958 
End bp666923 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content53% 
IMG OID639699647 
ProductCRISPR-associated Csh2 family protein 
Protein accessionYP_843069 
Protein GI116753951 
COG category[L] Replication, recombination and repair 
COG ID[COG3649] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR02590] CRISPR-associated protein, Csh2 family
[TIGR01595] CRISPR-associated protein, CT1132 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00285412 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAG TCTCGAACAG ATCTGAGCTG CTGTTCATCT ACGATATAAG AGATGGGAAT 
CCGAATGGAG ATCCGATGGA CGAGAACAAA CCGCGCATGG ATGAGGAGAC AGGGGTGAAC
CTGGTAACCG ATGTGCGTCT CAAGAGGACG ATAAGAGATT ACCTCCACAA TTTCAAAGGG
CTCGAGATAT TCGTGAGGGA GATAATCTAT GATGAGGAGA ACGGGTACAT CCAGGACGCC
AAGAGGAGGG CCAAGGATTT CGGGGAAGAT CAGGAGAGGA TTCTGAGTGA GTGCATCGAC
GTGAGGCTGT TCGGCGGTGT GATTCCGCTA GAGAAACGGA GACAGAACAA GCAAAAAGAT
GAGGGTGAGG GATCATCCAA AGGGGATTCG ATTACCTATA CAGGACCTGT TCAGTTCAAG
ATGGGGCGCT CGCTCCACAG GGTGGCCCTG AAGCACATAA AGGGCACAGG AGCATTCGCC
TCGAAGGAGG GCATGACGCA GGCGACGTTC CGCGAGGAGT ATGTTCTCCC CTACTCACTG
ATACTCTTCT ACGGCATAAT AAACGAGAAT GCTGCGAAGC ACACTGCTCT CACAGAGGAG
GATGTGAGGC TGCTCCTCGA GGGCATGTGG AACGGGACGA AGAGCTTGAT ATCGAGAACG
AAGGCAGGAC AGGTGCCCAG GCTGCTGCTC AAGGTCAACT ACAGCAAGGC GAACTACCAC
ATCGGGGATC TGGACAGGAT GATAAAGCTG GTATCGGATG TGCAGCACGA GGCGATCAGA
GGGCCCGAGG ATTTCTGTCT CGATGTCTCA GCGCTTGTGA GCAGGCTCAA AGCTGAGAAG
GACTCGATCA GGGATCTTGA GCTCTGCTTC GACAGGCAGC TCAGGTTCGT CAGGGACGGC
GCCGAGTTCT CCATGGAGAA GCTGAACGAA GCAACTGGCA TAGCGGTAAA TCCGATTGCG
TTCTAG
 
Protein sequence
MSTVSNRSEL LFIYDIRDGN PNGDPMDENK PRMDEETGVN LVTDVRLKRT IRDYLHNFKG 
LEIFVREIIY DEENGYIQDA KRRAKDFGED QERILSECID VRLFGGVIPL EKRRQNKQKD
EGEGSSKGDS ITYTGPVQFK MGRSLHRVAL KHIKGTGAFA SKEGMTQATF REEYVLPYSL
ILFYGIINEN AAKHTALTEE DVRLLLEGMW NGTKSLISRT KAGQVPRLLL KVNYSKANYH
IGDLDRMIKL VSDVQHEAIR GPEDFCLDVS ALVSRLKAEK DSIRDLELCF DRQLRFVRDG
AEFSMEKLNE ATGIAVNPIA F