Gene Mthe_0587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0587 
Symbol 
ID4462568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp607217 
End bp607909 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content53% 
IMG OID639699594 
ProductABC transporter related 
Protein accessionYP_843018 
Protein GI116753900 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.00317e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGGGTGA TATCGCTCAG CGACATAAGA AAGACATACA TCACAGGCGA TGTGGAGCTC 
CCCGTGCTGA AGGGAATCAA CCTTAGCATA GACTCGGGAG ATTTCCTGGC GCTGATGGGG
CCGTCGGGCA GCGGGAAATC CACGCTTATG AACATCATCG GATGTCTTGA CAGACCAACT
GCAGGCACCT ACATTCTTCT CGATCGGGAT GTGAGCAGGG CTTCAGAGGA GGAGCTCGCG
ATGATAAGAA GAGACAGAAT AGGCTTCATA TTCCAGGCCT TCAATCTCAT CGGGCGGATA
TCCGTGCTCA AGAATGTCGA GCTGCCGATG ATGCTCAAAG GCATGCCACG TGATGAGCGG
AGAGACAGAG CGCTTGAGCT GCTGAAGTCC GTTGGCGTGG CGCACAGGGC AGATTTCAGC
CCGCTCAACA TCTCCGGAGG AGAAAGGCAG AGGGTCGCGA TAGCACGGGC GCTTGCAAAC
AACCCTGAGA TCATAATCGC GGACGAGCCC ACAGGGAATC TTGATCTCAA AAGCACAGAG
GAGGTAATGG ATATTCTGAG CGGTCTGAAC AGAGAAGGCC GGACGATCAT AATGGTCACA
CACAACCCTG AGATAACAAA GTACTGCAAC CGTGTCATCG GAATGAGGGA CGGCAGAATA
CTAGATCAGT CATCGATGGA GGAATCATCA TGA
 
Protein sequence
MRVISLSDIR KTYITGDVEL PVLKGINLSI DSGDFLALMG PSGSGKSTLM NIIGCLDRPT 
AGTYILLDRD VSRASEEELA MIRRDRIGFI FQAFNLIGRI SVLKNVELPM MLKGMPRDER
RDRALELLKS VGVAHRADFS PLNISGGERQ RVAIARALAN NPEIIIADEP TGNLDLKSTE
EVMDILSGLN REGRTIIMVT HNPEITKYCN RVIGMRDGRI LDQSSMEESS