| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0580 |
|---|
| Symbol | |
|---|
| ID | 4462561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 600527 |
|---|
| End bp | 601216 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639699587 |
|---|
| Product | cobalt transport protein CbiM |
|---|
| Protein accession | YP_843011 |
|---|
| Protein GI | 116753893 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0647937 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACATCA TGGAGGGGTT TCTCCCGCAT CCCTGGTGGG AGATATGGTT TGCGGCATCG
CTTCCTTTCG TGGCATATGG AGTGAGCAGG ATAAGCAGAA TGGCGCGTGA GCAGCGCGAG
ACCCTGCCGC TTCTGGCGGT AGCGGGCGCC TTTATATTTG TGCTCTCGTC CCTGAAGCTC
CCCTCTGTCA CAGGGAGCTG CTCGCATCCC ACAGGCACAG GCATAGGCGC CATACTGTTT
GGACCTTGGA TAACGTCCGT CCTCTCCACA ATCGTTCTCC TGTACCAGGC GCTTTTTCTG
GCGCATGGAG GTCTGAGCAC GCTCGGGGCG AACGTCTTCT CCATGGGGAT TGCCGGGCCT
GTGGTGGGGT ATCTGATCTA CAGAGCGACG CAGAGGTTCA ACCTGTACTT CGCTGTCTTC
CTGGCAGCAG CACTGGCGGA TCTCGCGACA TACCTCGTGA CATCACTGCA GCTCGCGCTT
GCGTTTCCAG CTGCTGATGG GGGAGTTCTT CTCTCACTGA AGGCGTTTGC CGCGGTTTTC
GCGATAACGC AGGTGCCGCT GGCTGGTATA GAGGGTGTGA TCTCGGCTCT CATGTTCAAA
TACATACTCC AGGCGAGGAG TGATGTTCTG ATAAGACTCA ATGTTATCTC AAAACCCGAT
CTCTTGAGGC TGCAGGGGGG TGCGACATGA
|
|---|
| Protein sequence | MHIMEGFLPH PWWEIWFAAS LPFVAYGVSR ISRMAREQRE TLPLLAVAGA FIFVLSSLKL
PSVTGSCSHP TGTGIGAILF GPWITSVLST IVLLYQALFL AHGGLSTLGA NVFSMGIAGP
VVGYLIYRAT QRFNLYFAVF LAAALADLAT YLVTSLQLAL AFPAADGGVL LSLKAFAAVF
AITQVPLAGI EGVISALMFK YILQARSDVL IRLNVISKPD LLRLQGGAT
|
|---|
| |