Gene Mthe_0552 details

Gene Information

• Locus tag: Mthe_0552
• ID: 4463012
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: +
• Start bp: 573332
• End bp: 573862
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 639699558
• Product: tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit
• Protein accession: YP_842983
• Protein GI: 116753865
• COG category: [C] Energy production and conversion
• COG ID: [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
• TIGRFAM ID: [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGCATA GAGTGAGATC CCCTCTCAGT GAGGGAGATG TATCAAAACT CTCTGCCGGC 
GACATCGTCT GGCTGAGCGG TGTTATTTAT ACCGCAAGAG ATAAGGCTCA CCAGAGGCTC 
GGAGAGGTGA AATTCGATCT CAGGGGAGGG GTGATATACC ACTGCGGGCC GCTCATAAGA 
GACACGACTG TTGTATCAGC AGGCCCGACG AGCAGCGTGC GTCTGGCGCG CTATACTCCA 
CAGGTCCTCG ATCTCGGGGT GAGATGCATC ATTGGAAAGG GAGGAATGCC CGGAGCTGCA 
GAGCTCATGA GAGGGAGGGC TGTATACCTC GCCTATCCCG GTGGATGTGG AGCGGCTGCA 
GCGAGATCTC TGAGCGTCCG AGGGGTGTGT CTTTCAGAGC TTGGAATGGC AGAGGCTGTC 
TGGGAGTTCG AGGCCACTGA CCTCGGCCCC ATGGTCGTTG CGATAGACTC CCACGGAAGG 
GATCTTTACA GAGAGGTGAG AGAATCTGCA AAGAAGCACC TGAAGCGCTG A 

 

Protein sequence

MEHRVRSPLS EGDVSKLSAG DIVWLSGVIY TARDKAHQRL GEVKFDLRGG VIYHCGPLIR 
DTTVVSAGPT SSVRLARYTP QVLDLGVRCI IGKGGMPGAA ELMRGRAVYL AYPGGCGAAA 
ARSLSVRGVC LSELGMAEAV WEFEATDLGP MVVAIDSHGR DLYREVRESA KKHLKR