Gene Mthe_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0542 
Symbol 
ID4463002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp562804 
End bp563907 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content55% 
IMG OID639699548 
Productaminotransferase, class I and II 
Protein accessionYP_842973 
Protein GI116753855 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0515807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTTG CAAAGCACAT AACGGAGATT GAGAGCTCTG GTATAAGGAA ATGTTTTGAT 
GGCGTCGGAC CTGGCGCGGT AAACCTGAGC ATTGGTCAGC CAGATTTCGA CACGCCCGGG
CACATAAAAG AAGCCGCAAT CAAAGCGATC GAGCAGGGGA TGACGGGATA CACACCAAAC
CTGGGAATAC CGGAGCTGAG AGCTGCGATA TGCGAGAAGC TCAGGCGCGA GAATGGACTG
ACATTCTCTC CGGATCAGAT AATGGTGACA TCTGGCGCAA GTGAGGCTCT CTTTCTGGCC
ATCGCTGCTG TCACATCACC AGGTGATGAG GTGCTGATGC CGGATCCGGG ATTCGTTTCA
TACAGACCGC TGGTCCAAGC TGCCAATGGA CGTCCGGTTG GTGTGCACCT CGATCATGAG
TTGAAGCTCT CTGTCGATAC GGTCGCGGAG CACATCACGC CAAAGACTAG CGCGATCATA
GTGAACTCGC CCGCAAACCC AACAGGCGCA GTCCAGTCGG AGAGCGAGAT CAGGGGCCTG
GCAGAGCTCG CCGATGATAA AGGAATAGCG CTCATCTCTG ATGAGGTCTA TGAGCACTTC
ATATACGAGG GGGAGCACGT CAGCCCCGCC AGGTACGGTG AGAATGTCAT AACAGTGAAC
GCGGTCTCGA AGACATATGC CATGACAGGA TGGAGGCTCG GCTACCTGGC TGCACCTCCA
GAGGCGATCG ATGTTATGCT TAAGATCCAC CAGTACATCC AGGCATGTGC ATCATCCATA
TCACAGGCAG CTGCGCTTGC AGCCATAACC GGTCCACAGG ATTGCGTGAG GGAGATGAGA
GAGAGCTTCC GCAGGCGGAG GGATATGATG ATACGCGGTC TTCGAGATCT CGGCTTGGAT
CTGGTGGTTC CAAAGGGCGC GTTTTACATT TTCCCCCGGG TCGGGGATGG AGATGAATTC
GCGGCCAGGC TGGGTGCAGC AGGTGTCATA ACTGTGCCCG GATCTGCATT CGGAGTGAAC
GGAAAGCCAC ATATACGGAT ATCATACGCC GTGTCCGAGG ATAACCTGAG GCTCGCACTG
GAGAGGATGA AGGAGGTGGT CTGA
 
Protein sequence
MRFAKHITEI ESSGIRKCFD GVGPGAVNLS IGQPDFDTPG HIKEAAIKAI EQGMTGYTPN 
LGIPELRAAI CEKLRRENGL TFSPDQIMVT SGASEALFLA IAAVTSPGDE VLMPDPGFVS
YRPLVQAANG RPVGVHLDHE LKLSVDTVAE HITPKTSAII VNSPANPTGA VQSESEIRGL
AELADDKGIA LISDEVYEHF IYEGEHVSPA RYGENVITVN AVSKTYAMTG WRLGYLAAPP
EAIDVMLKIH QYIQACASSI SQAAALAAIT GPQDCVREMR ESFRRRRDMM IRGLRDLGLD
LVVPKGAFYI FPRVGDGDEF AARLGAAGVI TVPGSAFGVN GKPHIRISYA VSEDNLRLAL
ERMKEVV