| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0509 |
|---|
| Symbol | |
|---|
| ID | 4463422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 520069 |
|---|
| End bp | 521160 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639699512 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_842940 |
|---|
| Protein GI | 116753822 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5643] Protein containing a metal-binding domain shared with formylmethanofuran dehydrogenase subunit E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00001659 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGAT ATGTTTTAAG TAGTATCTGC ATCACCCTTG TCCTGATATC ATGCGCGTTT
GCAGACGATG CCATGATACA GGAGATTGGT GTCAAAGCTG CAGAGAAGGC GATGAGCGAG
TTATCCTTCC AGAAAGGCGA TGAGAACATA CTTGTTTTGA CGAATGCCGG TTATGCGATC
GTCTCAGGCA TGACCACCCA GAAGGCGCTG AAGGGCATTA CTGAGACAGC AGGCTGCTCT
CATGGCGACG GAAACCTCTT TCAGGTTCTA AGGCCGCATT GGAAGCCGCT GTGGTTCTAC
TTCTTCGATA AGAACAGCAA AGAGGCGCTG TATCTGGAAG TGAAGCCGGA GGCGCTCTCG
ATGAGTTTGG AGGAGTTGAA AGCTGCGTCG GATGATGCAG TCTTCTCAAA GATCTCAAAG
GCAAATGTGG ATCTCGATTA CCTATTGAAT AACACCGATG AAGGTAACAG AACTTTTAAC
GAGAAGCTCT TCAACGGGAA CGAGTTCTCG CTTGTCGGCA TCTCGAATGT GTGGGCGAGG
AACGCCAGCT TTGACTTCAT TCAGGCTACT TCATTCCATG ATCATCTCTG CCCTGGAGTC
ACCAGTGGAT ACATGATCGC GAAATACGTG GAGAGGGAGC TGCCGATAAA CAGCAGTGCC
GAGAGCTACA AGGTGATAGC AGTGCCTCCA TGGTGCAAGG ATGACGCACT CCAGATTCTC
TGGGATGCGA CGGTCGGGAA GAGCGGCATC TTCGTCATGG CTCTGACGGA CACGGAGAAG
AATGCGCTCA AGGCGAAGTA CAACCAGAGC GACGTTGCGG GGATATTCGT GAGATGGAAT
GATACCGCAA AGCAGGGGGA TGCGCTGGTT CTGAGCTTCA ACTGGACCAG GATGTACGAG
CTCACGGAGA CGAAGGACTG GAAGGGCCCA TCCTGGGCGC CGAAGCTCGT GATGGATGTT
CGCATGATGG ACTACTGGGA TGAGCCAGAG ATCGCGGTGA GCGTTATAAA GAGATTCCAG
GTTGACCAGA ACATGCTGGC CCAGCTCCAG AACGCTGGCA TGCATCCCCT GAAGGTTGCG
GGAGTGATGT GA
|
|---|
| Protein sequence | MMRYVLSSIC ITLVLISCAF ADDAMIQEIG VKAAEKAMSE LSFQKGDENI LVLTNAGYAI
VSGMTTQKAL KGITETAGCS HGDGNLFQVL RPHWKPLWFY FFDKNSKEAL YLEVKPEALS
MSLEELKAAS DDAVFSKISK ANVDLDYLLN NTDEGNRTFN EKLFNGNEFS LVGISNVWAR
NASFDFIQAT SFHDHLCPGV TSGYMIAKYV ERELPINSSA ESYKVIAVPP WCKDDALQIL
WDATVGKSGI FVMALTDTEK NALKAKYNQS DVAGIFVRWN DTAKQGDALV LSFNWTRMYE
LTETKDWKGP SWAPKLVMDV RMMDYWDEPE IAVSVIKRFQ VDQNMLAQLQ NAGMHPLKVA
GVM
|
|---|
| |