Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_0468 |
Symbol | |
ID | 4462625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | - |
Start bp | 484494 |
End bp | 486080 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639699470 |
Product | Na+/solute symporter |
Protein accession | YP_842899 |
Protein GI | 116753781 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.280127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTGT TACTTCTCAA CGTATTGGTG GTCGTCTATC TGCTTGTCAC GCTCTACCTG GGATACAGGG GCTGGGTGAC GACGAGGGAC ACCGAAGGAT ACATGGTGGC GGGCAGAAAG ATCCATCCTT ACATAATGGC GATGAGCTAC GGGGCAACAT TCATCAGCAC CTCCGCGATC GTGGGGTTCG GCGGCATGGC AGGTCTCTTC GGCATGGGGC TTCTGTGGCT GACATTCCTC AACATCTTTG TGGGGATATT CATAGCGTTC ATAATTTACG GAAAGCGCAC GAGGAGGATG GGTTACAACC TGGGAGCTAT GACGCTCCCG GAGCTGATGG GCCGGAGGTT CGACAGCCAG TTCATCCAGT GGTTCAGCGG GCTTGTGATC TTTCTCGGGA TGCCTTTATA TGCATCCGTC GTTTTAATTG GTGCTGCCAG GTTCATGGAG ACCACGCTCT CAATAGACTT CAACCTCGCG CTGCTTATCT ACTCGCTCAT AATCGCTGCC TACGTGGTCT GGGGCGGCCT GAAGGGGGTC ATGTACACAG ATGCGATGCA GGGCACGGTA ATGTTTCTGG GGATGATATT TCTTCTCATC ATGACCTATC TCCACCTTGG AGGTGTGACA GCTGCCCACC AGGCGCTCAC AGACATGGCG AACCTGGTTC CTCAGAGCCT TGCGGCACAG GGTCACAGAG GATGGACGAG CATGCCAGCG CTCGGAAGCG CATGGTGGTG GACACTGGTC TCGACCGTGG TCCTCGGTGT CGGGATTGGC GTCCTCGCGA TGCCGCAGCT CGCGGTGAGA TTCATGACGG TGAGATCCGG CAGGGAGCTG AACCGCGGTG TCCTGATCGG CGGCGTGTTC ATACTCGCAA TGACCGGCGT TGCGTTCGAT GTCGGGGCTC TGTCAAACGT CTTCTTCCAT GCCACACAGG GCAAGATAGC GATAGAGGTG GCTAAGGGGA ACGCGGACAG CATAATACCT GTTTACATCA ATGCGGCGAT GCCGGAGTGG TTTGTGTACC TCTTCATGCT CACACTCCTC GCAGCAGCAA TGTCCACATC GAGCTCTCAG TTCCATGCCC AGGGCACCGC GATCGGCAGG GATATCTATG AGACGCTGAC AGGGAAAAAG GGAACAGGGT CAATACTGGT GACGAGGGCA GGGATCATAG TGGCTGTGGT CATCGCGGTC GTCCTCGGAT ACATACTTCC GGAGAACATC ATCGCCAGGG GCACATCCAT ATTCTTCGGG CTCTGTGCAG CCGCGTTCCT CCCGATGTAC ACATGCGCTC TCTTCTGGAG GCGGGCCACA AGAGCGGGCG CGATCGCGGG GCTCGTGACC GGCACGTTCT CGAGCGTGCT CTGGATGGTC TTCGTCCATA AAAAAGAGGC AGAGGCCCTC GGCATATCCA GATTCATATT CGGCAGGGAT GTGCTCATAA CCCAGATGCC CTGGCCTGTA GTGGATCCAA TAGTGGTTGC GCTGCCGCTG GCGTTTTTAG TCACGATCGT TGTGAGCATA CTCACGAGAC CACCGGACAC CGCGCATCTT GATCGATGCT TTAAGGGCAT CAAATAA
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Protein sequence | MNLLLLNVLV VVYLLVTLYL GYRGWVTTRD TEGYMVAGRK IHPYIMAMSY GATFISTSAI VGFGGMAGLF GMGLLWLTFL NIFVGIFIAF IIYGKRTRRM GYNLGAMTLP ELMGRRFDSQ FIQWFSGLVI FLGMPLYASV VLIGAARFME TTLSIDFNLA LLIYSLIIAA YVVWGGLKGV MYTDAMQGTV MFLGMIFLLI MTYLHLGGVT AAHQALTDMA NLVPQSLAAQ GHRGWTSMPA LGSAWWWTLV STVVLGVGIG VLAMPQLAVR FMTVRSGREL NRGVLIGGVF ILAMTGVAFD VGALSNVFFH ATQGKIAIEV AKGNADSIIP VYINAAMPEW FVYLFMLTLL AAAMSTSSSQ FHAQGTAIGR DIYETLTGKK GTGSILVTRA GIIVAVVIAV VLGYILPENI IARGTSIFFG LCAAAFLPMY TCALFWRRAT RAGAIAGLVT GTFSSVLWMV FVHKKEAEAL GISRFIFGRD VLITQMPWPV VDPIVVALPL AFLVTIVVSI LTRPPDTAHL DRCFKGIK
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