| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0452 |
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| Symbol | |
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| ID | 4462591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 468225 |
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| End bp | 468947 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639699454 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
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| Protein accession | YP_842883 |
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| Protein GI | 116753765 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00365072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGCAC GTTTCAGATA CGGAGATCGT GTGTTTGATG GAGATGTTGA TGGTGACCGC
ATTGTATCAG ACGGCGTTTC ATACGAGCTG GAGGAGGTGA AGCTTCTCCC GCCATCAGTC
CCCACAAAGG TTGTCTGCGT GGGTCTGAAC TACCTGGAGC ATGCGCGGGA GCTCAGGATG
GATCTGCCAG ATGAGCCGAT CATATTTTTA AAGCCGCCAT CCGCTGTTGT GGGCCACGAC
GATGAGATAA TCCTGCCGGA GATGAGCAGA CGCGTCGACT ACGAGGGCGA GCTTGCTGTT
GTCATTTCCA GGAGGTGCAG GAGGATCTCC GCAGATGAAG CTGATGATTA CATTCTGGGA
TACACATGCT TCAACGATGT CACAGCCCGC GATCTCCAGC AGAAGGACGG ACAGTGGACC
AGGTCGAAGA GCTTCGATAC ATTCGCTCCT GTGGGGCCAT GGGTGGCTCA GATGAGCGTT
GAGGATGCGG AGGACCTCAG CATATCCACC AGGGTCAACG GGGAGACAAG ACAGAGATCG
AACACCTCTG ACCTTATATT CGGGGTCGCA GAGCTGGTGG AGTTCGTGAG CTCCATAATG
ACGCTGGAGC CAGGAGATGT CATAGCAACA GGCACACCTC CAGGGGTTGG AAGGCTCGAG
AGCGGCGACA TCGTTGAGGT CGAGATAGAG GGGATAGGCC TGCTCAGGAA CCGGGCAGTC
TAA
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| Protein sequence | MIARFRYGDR VFDGDVDGDR IVSDGVSYEL EEVKLLPPSV PTKVVCVGLN YLEHARELRM
DLPDEPIIFL KPPSAVVGHD DEIILPEMSR RVDYEGELAV VISRRCRRIS ADEADDYILG
YTCFNDVTAR DLQQKDGQWT RSKSFDTFAP VGPWVAQMSV EDAEDLSIST RVNGETRQRS
NTSDLIFGVA ELVEFVSSIM TLEPGDVIAT GTPPGVGRLE SGDIVEVEIE GIGLLRNRAV
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