Gene Mthe_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0342 
Symbol 
ID4461971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp341767 
End bp342570 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content49% 
IMG OID639699347 
Productperiplasmic binding protein 
Protein accessionYP_842776 
Protein GI116753658 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.102535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATGCT TTATCCTGCT TGTAATGCTG GCTCTTCTAG TTGTACCATC AATGGCACAG 
CAAGAGCAGC CGATCACCAT CAGAGATGAA GATGGGCGAG ACGTGGTGAT TCCTGCAACT
CCTGAAAAGA TTGTATGCCT CTCCCCTGCT GCAGCCGAGG TGCTCTGCGC TCTGGGCATG
TCTGACAAGA TTGCCGCAGT CACCGAGGAT TGCATTATAC CCTCACTATG TCGCTGCCTT
CAGGAGAAGG AACGTGTGGG TACATCCGGC AGGAATGCAG ATCTTGAGAG GATACTGGAG
CTGAAGCCGG ATCTGGTAAT AGCCAAGACC GGCTCTTTAT TCCCGGAGGA GAGCGAAAAG
GTTCTCGTCA GTTGTGGGAT CCCCGTTCTC AGATATCGCG CGTTGCATAT CGACGCTCTT
ATTCCGATGA TCAACGATCT GGGTAGGATA GTAAATGCAG AGGATAAATC ACATGAGATC
ATTGGCTGGA TCACCAAATA CTACAACACT ATTCTGGAGC GAGTAAGCTT GGTTCCTGAG
AGCGAGAGAC CCACGGTATA CTTCATGTCC ATGGGGCACT TCGATTGGAC CGCAGGGAAC
CAATCAGCTG GTGATATAAG AATTTCAGAG GCTGGTGGCA GGAATATCGC TGGAAATCTC
ACTGAAACGG TCCCGCATGT GGACATGGAG TGGGTCATCC AGCAGAATCC ACAGATAATA
ATATTCTCAA TGGCATCGAA TCAGTACAAG GGAGATACAC CAACAGAGGA CGAGATGAGA
GTGCTGTGTT GGATAACTAT TTAA
 
Protein sequence
MRCFILLVML ALLVVPSMAQ QEQPITIRDE DGRDVVIPAT PEKIVCLSPA AAEVLCALGM 
SDKIAAVTED CIIPSLCRCL QEKERVGTSG RNADLERILE LKPDLVIAKT GSLFPEESEK
VLVSCGIPVL RYRALHIDAL IPMINDLGRI VNAEDKSHEI IGWITKYYNT ILERVSLVPE
SERPTVYFMS MGHFDWTAGN QSAGDIRISE AGGRNIAGNL TETVPHVDME WVIQQNPQII
IFSMASNQYK GDTPTEDEMR VLCWITI