Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_0342 |
Symbol | |
ID | 4461971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | + |
Start bp | 341767 |
End bp | 342570 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639699347 |
Product | periplasmic binding protein |
Protein accession | YP_842776 |
Protein GI | 116753658 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.102535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATGCT TTATCCTGCT TGTAATGCTG GCTCTTCTAG TTGTACCATC AATGGCACAG CAAGAGCAGC CGATCACCAT CAGAGATGAA GATGGGCGAG ACGTGGTGAT TCCTGCAACT CCTGAAAAGA TTGTATGCCT CTCCCCTGCT GCAGCCGAGG TGCTCTGCGC TCTGGGCATG TCTGACAAGA TTGCCGCAGT CACCGAGGAT TGCATTATAC CCTCACTATG TCGCTGCCTT CAGGAGAAGG AACGTGTGGG TACATCCGGC AGGAATGCAG ATCTTGAGAG GATACTGGAG CTGAAGCCGG ATCTGGTAAT AGCCAAGACC GGCTCTTTAT TCCCGGAGGA GAGCGAAAAG GTTCTCGTCA GTTGTGGGAT CCCCGTTCTC AGATATCGCG CGTTGCATAT CGACGCTCTT ATTCCGATGA TCAACGATCT GGGTAGGATA GTAAATGCAG AGGATAAATC ACATGAGATC ATTGGCTGGA TCACCAAATA CTACAACACT ATTCTGGAGC GAGTAAGCTT GGTTCCTGAG AGCGAGAGAC CCACGGTATA CTTCATGTCC ATGGGGCACT TCGATTGGAC CGCAGGGAAC CAATCAGCTG GTGATATAAG AATTTCAGAG GCTGGTGGCA GGAATATCGC TGGAAATCTC ACTGAAACGG TCCCGCATGT GGACATGGAG TGGGTCATCC AGCAGAATCC ACAGATAATA ATATTCTCAA TGGCATCGAA TCAGTACAAG GGAGATACAC CAACAGAGGA CGAGATGAGA GTGCTGTGTT GGATAACTAT TTAA
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Protein sequence | MRCFILLVML ALLVVPSMAQ QEQPITIRDE DGRDVVIPAT PEKIVCLSPA AAEVLCALGM SDKIAAVTED CIIPSLCRCL QEKERVGTSG RNADLERILE LKPDLVIAKT GSLFPEESEK VLVSCGIPVL RYRALHIDAL IPMINDLGRI VNAEDKSHEI IGWITKYYNT ILERVSLVPE SERPTVYFMS MGHFDWTAGN QSAGDIRISE AGGRNIAGNL TETVPHVDME WVIQQNPQII IFSMASNQYK GDTPTEDEMR VLCWITI
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