Gene Mthe_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0065 
Symbol 
ID4463042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp54727 
End bp55860 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content48% 
IMG OID639699073 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_842507 
Protein GI116753389 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGAGGGA TTGAGATAGT TCGCGGCTAT CAGGAGGATA TAATCGAAAC GATACCCAGC 
ACGATTATAA TCGTCGACAG GAGACTGGAG GTGCTGTATG CTAACAGAAA CTTCTATCTT
AAGTCCTTCC GGACTGAGAA GAATGCAATA GGCATGCACC TCTCGAAGAT ATTCTCTCCT
GTTTTCATGC AGAGGCTGAA TAGTAGAATA GAAAAGGTTT TCTCCGCCGG AGAGCCGTTT
GATGGGGAGC AGATCAGGTA TCCGGGAGGC AGGTTCTACT TTTACAGAAT ACATCCCCTG
AAGGAAGCTG GTGGTTACGT CAGCAAGGCA GTGATCTTCA TAGAGGATAT CACAGAGATG
ACCAGGCTCG AAGAGGAGCT GCGCGATTCA TACATAAAGC TTGAGAATGC CTATGCTGAG
CTCAAAGAGC TCGACAGCAT CAAGTCAGAG TTCGTGTCCA TGGTCTCACA CGAGCTTAGA
ACACCTCTTA CCGTAATTAA CAGCTATATC GAGATGTTCG AGGATGGTAT GCTCGGTGAT
CTCACAGATG TGCAGAAGGA GAAGCTCCAG CTGATCAGAT CGCAAACAGA CACAATGATC
CAGCTTGTAA ATGACATGCT AGATATCCTG AGAATCGGAT CAAGGCGGCT CAGGCTTAAG
AAGGAGCTGT CGAGCATGGA GGAGCTGATC CGCTCTGTGA TCGCAAGCTT ATCGAGGCTT
GCAGCTCTTA AAGAGCATAC GATAACATTC AGATGCGAGA GGGCCAATAC TCTGATAGAG
TGTGATCCCA AGAAGATAAT GCAGGTTTTG AGCAATCTGC TCACGAATGC AATTAAGTAC
ACCCCAGATA GAGGACAGAT TGAGGTGGTT CTCGGGGGGG ATGCAGAAAA CGTTCTGGTG
TCGATCAGAG ACAACGGTAT AGGGATCCGA GAGGAGGACA AGGATCGGAT TTTTGAGAAG
TTCTTCGTTA TGAGCAATGA GAAGAGTGCG GATATTGGCA TGGGTCTTGG CCTCTCCATA
ACAAAGGATA TTGTGGAGGC GCATGGCGGA CGGATATGGT TCGAGAGCAG GTTCGGAGAG
GGGAGCACAT TCTACTTCAC TCTCCCCTGT GGTAAGGATA CTGAGCGTTC TTAA
 
Protein sequence
MRGIEIVRGY QEDIIETIPS TIIIVDRRLE VLYANRNFYL KSFRTEKNAI GMHLSKIFSP 
VFMQRLNSRI EKVFSAGEPF DGEQIRYPGG RFYFYRIHPL KEAGGYVSKA VIFIEDITEM
TRLEEELRDS YIKLENAYAE LKELDSIKSE FVSMVSHELR TPLTVINSYI EMFEDGMLGD
LTDVQKEKLQ LIRSQTDTMI QLVNDMLDIL RIGSRRLRLK KELSSMEELI RSVIASLSRL
AALKEHTITF RCERANTLIE CDPKKIMQVL SNLLTNAIKY TPDRGQIEVV LGGDAENVLV
SIRDNGIGIR EEDKDRIFEK FFVMSNEKSA DIGMGLGLSI TKDIVEAHGG RIWFESRFGE
GSTFYFTLPC GKDTERS