| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0034 |
|---|
| Symbol | |
|---|
| ID | 4463412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 32134 |
|---|
| End bp | 32691 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639699042 |
|---|
| Product | 30S ribosomal protein S7P |
|---|
| Protein accession | YP_842477 |
|---|
| Protein GI | 116753359 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0049] Ribosomal protein S7 |
|---|
| TIGRFAM ID | [TIGR01028] ribosomal protein S7(archaeal)/S5(eukaryotic) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGTAT TTGGAAAGTG GGATGCATCA GAGGTGGAGA TCCCGGATCT GAGCGTAAAG
GGCTACATCA ACCTGAAGCC GAGGATTGTG CTGCACACCG GCGGCAGGCA TGCGAAGCAG
CAGTTCAAGA AGTCCGAGCT TCACGTGGTC GAGCGTCTGA TCAACAAGAT GATGAGGAAG
GAGAAGAACA CAGGGCAGAA GCAGATCGCA TACAGGATAG TGGAGGAGGC CTTCGACATA
ATCCATTCGC GGACGAAGGA GAACCCTCTG TCCGTCCTGG TCAGGGCCAT CTCAAACGCA
GGACCGCGTG AGGAGGTTGT CAGGCTCAAA TACGGTGGTA TCACTGTTCC AAAGGCTGTG
GATACCGCAC CTCAGAGACG CGTCGATACC GCGCTGATGC TCATAGCAAA GGGCGCATGG
CAGGCATCTT TCAAGAGCAG GCGCTCCATC CAGAACTGCC TGGCAGATGA GATCATAGCT
GCTGCAAATT ACGACGTGAA GAGCTTCGCT GTCAGCAGGA AGGACAGCAT TGAGCGTGTG
GCAAAGGCCG CCAGGTAG
|
|---|
| Protein sequence | MKVFGKWDAS EVEIPDLSVK GYINLKPRIV LHTGGRHAKQ QFKKSELHVV ERLINKMMRK
EKNTGQKQIA YRIVEEAFDI IHSRTKENPL SVLVRAISNA GPREEVVRLK YGGITVPKAV
DTAPQRRVDT ALMLIAKGAW QASFKSRRSI QNCLADEIIA AANYDVKSFA VSRKDSIERV
AKAAR
|
|---|
| |