| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0033 |
|---|
| Symbol | rps12P |
|---|
| ID | 4463411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 31707 |
|---|
| End bp | 32129 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639699041 |
|---|
| Product | 30S ribosomal protein S12P |
|---|
| Protein accession | YP_842476 |
|---|
| Protein GI | 116753358 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0048] Ribosomal protein S12 |
|---|
| TIGRFAM ID | [TIGR00982] ribosomal protein S23 (S12) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATCA ATGCGGCCAG GAAGATGGAA GATGACTGGA AGAAGCTGAG GTGGAGCGAT
CCTCATTACT GCAGGCGGGC TCTCGGCCTC AAGGTCAAGG CTGATCCTCT GGGCGGGGCC
CCCAGAGCCA GGGGTATCGT TCTGGAGAAG GTGGGCGTCG AGGCGAAACA GCCGAACTCA
GCCATACGCA AGTGTGTGAG GATACAGCTG ATAAAGAACG GAAGACAGGT CACGGCATTC
TGTCCCGGTG ATGGTGCCAT AGGGTTCATA GACGAGCACG ATGAGGTCGT GGTCGAGAGG
ATCGGCGGAA GGATGGGACG ATCGATGGGC GACATACCCG GCGTGAGGTT CAAGGTCGTA
GCGGTGAACA ATGTCTCCCT CGAGGAGATG GTCTCGGGCC GCAAGGAGAA GCCGGTAAGG
TGA
|
|---|
| Protein sequence | MGINAARKME DDWKKLRWSD PHYCRRALGL KVKADPLGGA PRARGIVLEK VGVEAKQPNS
AIRKCVRIQL IKNGRQVTAF CPGDGAIGFI DEHDEVVVER IGGRMGRSMG DIPGVRFKVV
AVNNVSLEEM VSGRKEKPVR
|
|---|
| |