| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0030 |
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| Symbol | |
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| ID | 4463408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 29759 |
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| End bp | 30913 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639699038 |
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| Product | DNA-directed RNA polymerase subunit A'' |
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| Protein accession | YP_842473 |
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| Protein GI | 116753355 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02389] DNA-directed RNA polymerase, subunit A'' |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCTTC CAGAGTCATG GCTTAAAAGG ATAGACGAGC TCGATCTGCC GATCAGCCTC
AAGGACGCTA TCAAAAGCGG CCTGGAAGAG GCGGAGAGGG TGACTGAGGA GCAGTTCGAG
ACGATAATAA AGGAGGTCGT CGAGGACTAT GAACATGCGA GGGTCGAGCC GTGCGAGGCA
GTGGGCGTCG TCGCAGCCCA GTCCATCGGC GAGCCGGGCA CGCAGATGAC GATGCGTACT
TTCCACTACG CTGGCGTCGC GGAGATCAAC GTCACCCTCG GTCTTCCGAG GCTGATAGAG
ATCGTCGATG CACGCAAGAT CCCGTCGACG CCAACGATGA CCATACGGCT GCTGCCTGAG
TACGCCTCGG ATCGCGACAT GGCGAGGGAG GTCGCATGGG CAATCGAGGC CACCTCTATC
CTGCATCTGG GCTCGATAGC CACAGATCTC GCGGAGATGA ATGTGGTCAT AGAGCTCAAT
GAGGATGCGA TGGCACAGCG GAAGATCACA GCTGAGGATG TGGCCGAGAA GCTGAGAGAT
GCCACAGGTC TGACTGTGGA TCAAAAGGGG AACACCATCA TAATGGCGCC CGAGGAGCCG
TCTTACAGGG AGCTCTTGCA GCTGGTCGAG CGAATAAAGA AGGTCACGCT GAAGGGCGTT
GATGGTATAA AGCGTGTGGT CATCCGGAAG GAGGGGGATG AGTATGTCCT CTACACTGAG
GGCTCATCCC TCAAGGAGGT CCTGGAGTTC GAGGGCGTCG ATCCAACCAG GACCAAGACG
AACAACATTA ACGAGATATG CGAGGTCCTC GGAATAGAGG CAGCTCGCAA TGCAATAATC
AACGAGGCTA CCGAGACCCT CCGCGAGCAG GGCCTCCAGG TCGATGTCAG GCACATCATG
CTTGTCGCCG ATATCATGAC CTGTGACGGC GATGTGAAGC AGATCGGCAG ACATGGCGTA
TCAGGAGAGA AAGCGAGCGT CCTCGCTCGC GCTGCCTTTG AGGTCACTGT GAACCACATA
CTTGATGCCG CGATCCGTGG CGATGTGGAC GACCTCAGAG GCGTCACCGA GAACGTCATA
GTCGGCCAGC CGATCCGGCT TGGAACCGGA GACGTCCAGC TGGTAGCAAA AAGAATTGAT
GAGGTAGTTC GATGA
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| Protein sequence | MKLPESWLKR IDELDLPISL KDAIKSGLEE AERVTEEQFE TIIKEVVEDY EHARVEPCEA
VGVVAAQSIG EPGTQMTMRT FHYAGVAEIN VTLGLPRLIE IVDARKIPST PTMTIRLLPE
YASDRDMARE VAWAIEATSI LHLGSIATDL AEMNVVIELN EDAMAQRKIT AEDVAEKLRD
ATGLTVDQKG NTIIMAPEEP SYRELLQLVE RIKKVTLKGV DGIKRVVIRK EGDEYVLYTE
GSSLKEVLEF EGVDPTRTKT NNINEICEVL GIEAARNAII NEATETLREQ GLQVDVRHIM
LVADIMTCDG DVKQIGRHGV SGEKASVLAR AAFEVTVNHI LDAAIRGDVD DLRGVTENVI
VGQPIRLGTG DVQLVAKRID EVVR
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